Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RNA5SP267-201ENST00000364893 126 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-662P-201ENST00000384253 104 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 MIR627-201ENST00000384979 97 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-651P-201ENST00000411040 105 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 AC005326.1-201ENST00000429197 123 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 MTND5P15-201ENST00000434246 349 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 PRSS3P4-201ENST00000453323 162 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 SNORA70.12-201ENST00000516084 153 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 RNU2-34P-201ENST00000516534 121 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 AC098479.1-201ENST00000609225 154 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 AC073349.3-201ENST00000617616 186 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 RNU2-48P-201ENST00000410694 191 ntBASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 AL353705.1-201ENST00000433468 480 ntBASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 AC091826.1-201ENST00000514065 313 ntBASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 RNA5SP490-201ENST00000517141 136 ntBASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 AC009127.3-201ENST00000570531 403 ntBASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 AC011921.3-201ENST00000605540 361 ntBASIC2.99□□□□□ -1.93
PCDHA9Q9Y5H5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 AL159152.1-201ENST00000635019 2587 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 RNA5SP72-201ENST00000364442 117 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-1235P-201ENST00000384559 107 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 MIR23B-201ENST00000384832 97 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 RNA5SP171-201ENST00000391071 115 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.626-201ENST00000411288 95 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 AL445687.1-201ENST00000439946 251 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-498P-201ENST00000459468 107 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 AC109925.1-201ENST00000478069 331 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 SNORD116-28-201ENST00000516123 91 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 AC084757.4-201ENST00000616350 526 ntBASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PCDHA9Q9Y5H5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 DYNLT3P1-201ENST00000378574 347 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 RNU4-47P-201ENST00000410876 114 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 AL137159.1-201ENST00000452808 512 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 AC093259.1-201ENST00000509755 300 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 RN7SKP40-201ENST00000517211 242 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 AC136628.3-201ENST00000521868 290 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 MIR5680-201ENST00000577577 84 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 AL078604.3-201ENST00000615580 211 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 snoU18.1-201ENST00000629629 71 ntBASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
PCDHA9Q9Y5H5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 MIR411-201ENST00000362239 96 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-1272P-201ENST00000362776 107 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 SNORA7.4-201ENST00000384249 137 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 RNVU1-14-201ENST00000384770 164 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 MIR548I3-201ENST00000408378 149 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 MIR548I1-201ENST00000408810 149 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 RN7SKP220-201ENST00000410611 288 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 RNA5SP120-201ENST00000410900 112 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-57P-201ENST00000411348 103 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 AC123900.1-201ENST00000420390 96 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 AC006028.1-201ENST00000438379 402 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.644-201ENST00000459006 113 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 snoU13.22-201ENST00000459428 104 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 AC010598.1-201ENST00000510378 103 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.674-201ENST00000516362 113 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 Z83818.1-201ENST00000603584 150 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 AC004792.1-201ENST00000614523 137 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 MIR7112-201ENST00000616126 65 ntBASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.94
PCDHA9Q9Y5H5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.368-201ENST00000365547 113 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-418P-201ENST00000384035 107 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-211P-201ENST00000384047 107 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 SNORA11-201ENST00000408789 128 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AC008134.1-201ENST00000420943 193 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 Z96811.1-201ENST00000445880 108 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms