Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNA5SP490-201ENST00000517141 136 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 RNU6-667P-201ENST00000517186 102 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC131281.1-201ENST00000522984 164 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 RRN3P3-201ENST00000549207 578 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.37□□□□□ -2.03
PKP3Q9Y446 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC005034.5-201ENST00000604219 466 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 Y_RNA.772-201ENST00000606692 102 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC103810.6-201ENST00000606708 136 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AL021879.1-201ENST00000611756 288 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AL357075.2-201ENST00000614906 189 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC011476.5-201ENST00000615594 130 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC240442.1-201ENST00000616055 283 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PKP3Q9Y446 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 Y_RNA.458-201ENST00000384240 102 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 MIR300-201ENST00000401138 83 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 MRPL35P1-201ENST00000404272 572 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 AC074133.1-201ENST00000515696 183 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 SNORA31.15-201ENST00000516771 132 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 Y_RNA.713-201ENST00000517013 96 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 AC010205.1-201ENST00000616668 449 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 AC008873.1-201ENST00000625051 138 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 FO624990.1-201ENST00000636373 85 ntBASIC2.36□□□□□ -2.03
PKP3Q9Y446 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PKP3Q9Y446 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PKP3Q9Y446 MIR21-201ENST00000362134 72 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 RNU6-1305P-201ENST00000364353 104 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 SNORA67.1-201ENST00000364749 141 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 SNORD87-201ENST00000364849 89 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 SNORD31B-201ENST00000364977 69 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 RNU6-438P-201ENST00000365561 103 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 Y_RNA.439-201ENST00000384119 94 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 RNU6-611P-201ENST00000384276 104 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 MIR586-201ENST00000385035 97 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 RNU2-48P-201ENST00000410694 191 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 AC009963.1-201ENST00000417265 157 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 HMGN2P18-201ENST00000450680 270 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.35□□□□□ -2.03
PKP3Q9Y446 MRPS35P2-201ENST00000508242 191 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 RNU6-397P-201ENST00000516226 104 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 MIR4753-201ENST00000585119 83 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 RAC1P9-201ENST00000604990 392 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 MIR6852-201ENST00000621699 66 ntBASIC2.35□□□□□ -2.03
PKP3Q9Y446 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
PKP3Q9Y446 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 RNU6-545P-201ENST00000362681 104 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 Y_RNA.210-201ENST00000364161 110 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 SNORA67.2-201ENST00000384300 149 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 MIR1283-1-201ENST00000408494 87 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 RNA5SP504-201ENST00000410676 117 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 AC074290.1-201ENST00000448883 135 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 RNU6-625P-201ENST00000459412 107 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 AC010655.3-201ENST00000478818 450 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 RNU6-408P-201ENST00000515910 100 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 RNU6-991P-201ENST00000516168 107 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 RNU6-1046P-201ENST00000516538 107 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 RNU6-107P-201ENST00000516643 102 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 AC018448.1-201ENST00000552843 316 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 AC233702.2-202ENST00000562547 291 ntBASIC2.34□□□□□ -2.03
PKP3Q9Y446 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
PKP3Q9Y446 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PKP3Q9Y446 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.33□□□□□ -2.04
PKP3Q9Y446 Y_RNA.498-201ENST00000384460 102 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 AL079342.1-201ENST00000401460 267 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.33□□□□□ -2.04
PKP3Q9Y446 AC073910.1-201ENST00000445047 438 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 MTATP8P1-201ENST00000467115 207 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 AC114982.1-201ENST00000469402 321 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 HMGN2P9-201ENST00000476875 229 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 RPL26P26-201ENST00000480251 434 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.33□□□□□ -2.04
PKP3Q9Y446 SNORA40.15-201ENST00000516884 107 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.33□□□□□ -2.04
PKP3Q9Y446 PRELID2P1-201ENST00000552837 301 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.33□□□□□ -2.04
PKP3Q9Y446 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.33□□□□□ -2.04
PKP3Q9Y446 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.33□□□□□ -2.04
PKP3Q9Y446 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.33□□□□□ -2.04
PKP3Q9Y446 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PKP3Q9Y446 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PKP3Q9Y446 U3.8-201ENST00000363675 217 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 Y_RNA.276-201ENST00000364732 109 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 RNU1-52P-201ENST00000384190 164 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 RNU6-130P-201ENST00000411112 103 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 ELOCP21-201ENST00000412558 336 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms