Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 Y_RNA.673-201ENST00000516306 88 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 AL590240.4-201ENST00000616908 390 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 AC006001.4-201ENST00000622243 395 ntBASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
R3HCC1Q9Y3T6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-743P-201ENST00000364151 106 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 RNU2-54P-201ENST00000410299 190 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 RNU2-63P-201ENST00000410792 194 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 RPL23AP36-201ENST00000413895 458 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 AC005042.3-201ENST00000453230 174 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 SERF1AP1-201ENST00000514575 187 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 AC008885.1-201ENST00000514930 301 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-388P-201ENST00000517012 105 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-389P-201ENST00000517048 105 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 AC022080.3-201ENST00000544433 482 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 PRELID2P1-201ENST00000552837 301 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 MIR4325-201ENST00000583049 90 ntBASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
R3HCC1Q9Y3T6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 SNORD31B-201ENST00000364977 69 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-1026P-201ENST00000384465 108 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 Y_RNA.569-201ENST00000384749 103 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 AL139095.1-201ENST00000404326 391 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 AC009963.1-201ENST00000417265 157 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 MRPS10P1-201ENST00000448483 130 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 HMGN2P18-201ENST00000450680 270 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 NDUFB4P10-201ENST00000452541 359 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 AC018868.1-201ENST00000491307 315 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-155P-201ENST00000516347 100 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 SCARNA13-201ENST00000516672 275 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 RNU6-56P-201ENST00000516986 93 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 RNU2-12P-201ENST00000517216 168 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 MIR3670-2-201ENST00000582974 65 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 MIR3670-1-201ENST00000584160 65 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 MIR3670-3-201ENST00000584855 65 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 MIR3670-4-201ENST00000612260 65 ntBASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.28□□□□□ -1.88
R3HCC1Q9Y3T6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
R3HCC1Q9Y3T6 SNORA25.6-201ENST00000364121 118 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-1318P-201ENST00000365389 103 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.383-201ENST00000383855 97 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.418-201ENST00000384029 102 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.489-201ENST00000384410 101 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 SNORA48.5-201ENST00000391143 135 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 MIR300-201ENST00000401138 83 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 AC092427.1-202ENST00000430569 476 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 UBBP3-201ENST00000445497 241 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-1023P-201ENST00000516137 106 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 SNORA74D-201ENST00000516404 141 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 AC005357.1-201ENST00000588399 301 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 AL035425.3-201ENST00000564206 4996 ntBASIC3.27□□□□□ -1.89
R3HCC1Q9Y3T6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 SNORA9-201ENST00000384215 133 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 AL603910.2-201ENST00000407268 136 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 TOMM22P2-201ENST00000430735 237 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 AC016925.1-201ENST00000458303 298 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 RNU2-31P-201ENST00000516954 155 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 AC078938.1-201ENST00000620993 318 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 AC092593.1-201ENST00000515413 1815 ntBASIC3.26□□□□□ -1.89
R3HCC1Q9Y3T6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 AC108059.2-201ENST00000434626 151 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 POLR2KP2-201ENST00000438155 177 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 AC016717.1-201ENST00000448918 286 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 RNU7-57P-201ENST00000459540 60 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 RNA5SP490-201ENST00000517141 136 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 MIR3145-201ENST00000580727 82 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 MIR4753-201ENST00000585119 83 ntBASIC3.25□□□□□ -1.89
R3HCC1Q9Y3T6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 SNORD27-201ENST00000363981 72 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 SNORA20.1-201ENST00000364790 130 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-326P-201ENST00000365480 107 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms