Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-1186P-201ENST00000410429 97 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 RPS3AP1-201ENST00000413190 320 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 MTND2P18-201ENST00000419962 1030 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 AL031667.1-201ENST00000440222 725 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 SNORA14.1-201ENST00000516113 141 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 RNU6-947P-201ENST00000516264 106 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 RNU1-117P-201ENST00000517041 158 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 AC025423.5-201ENST00000550230 219 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 CYP3A137P-201ENST00000562436 69 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 FGF7P1-201ENST00000582820 288 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 AC027449.1-201ENST00000608890 407 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 AC007494.3-201ENST00000624660 743 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 OR5AK4P-201ENST00000635912 903 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
HHLA3Q9XRX5 FGF7P2-201ENST00000332473 296 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 RNA5SP361-201ENST00000362686 118 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 MIR508-201ENST00000384857 115 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AL034345.1-201ENST00000407768 123 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 CDK8P2-201ENST00000415020 547 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC008134.1-201ENST00000420943 193 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 MTND4P32-201ENST00000437189 1237 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 MTCO3P18-201ENST00000440206 761 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 RNU6-917P-201ENST00000516294 104 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 RNU6-344P-201ENST00000516635 111 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC104576.1-201ENST00000524225 88 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 SCOCP1-201ENST00000554676 349 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC004584.2-201ENST00000570407 410 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC008536.2-201ENST00000607284 349 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 uc_338.34-201ENST00000617467 174 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC022960.3-201ENST00000619794 441 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 ZNF204P-201ENST00000416749 2397 ntBASIC0.46□□□□□ -2.34
HHLA3Q9XRX5 AC023934.1-201ENST00000574529 2389 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 RNU6-1120P-201ENST00000362988 108 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 SNORA80D-201ENST00000384488 135 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MIR499A-201ENST00000384903 122 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MIR942-201ENST00000401111 86 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MTATP6P18-201ENST00000417994 673 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 RPS26P5-201ENST00000418544 335 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 AL358934.1-201ENST00000432346 324 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 AC073415.1-201ENST00000449240 153 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 SNRPGP9-201ENST00000456025 225 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 RPS29P1-201ENST00000465274 159 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MTND1P22-201ENST00000510572 951 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 RNU6-322P-201ENST00000516010 103 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 RNA5SP454-201ENST00000517231 127 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MTND4P7-201ENST00000523876 130 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 AC090049.2-201ENST00000550377 109 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 FRG2DP-202ENST00000566967 323 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 MIR4424-201ENST00000585257 86 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 U6.73-201ENST00000619194 103 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 AC068787.1-201ENST00000623908 691 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 FER-210ENST00000628534 558 ntTSL 5 BASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 AL390237.1-201ENST00000404226 1415 ntBASIC0.45□□□□□ -2.34
HHLA3Q9XRX5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 AP000568.1-201ENST00000282964 442 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 RNU6-199P-201ENST00000362954 107 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 Y_RNA.201-201ENST00000364052 96 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 RNU6-996P-201ENST00000365438 107 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 RNU6-1329P-201ENST00000365664 107 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 RNY3P10-201ENST00000384764 102 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 MT-TH-201ENST00000387441 69 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 U8.21-201ENST00000459536 136 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 RNA5SP255-201ENST00000516370 107 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 MTND1P5-201ENST00000517906 940 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 DEFB108E-201ENST00000524692 240 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 AP001372.4-201ENST00000524889 472 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 AK6P2-201ENST00000549020 471 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 AL050303.3-201ENST00000613704 284 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
HHLA3Q9XRX5 SNORD87-201ENST00000364849 89 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 MIR92A1-201ENST00000385233 78 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 SNORA75.2-201ENST00000391138 150 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 SNORA75.3-201ENST00000391231 150 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms