Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 RNU1-123P-201ENST00000458950 160 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.53□□□□□ -2.16
SMC3Q9UQE7 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 RNU6-566P-201ENST00000516790 107 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 RNA5SP454-201ENST00000517231 127 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.53□□□□□ -2.16
SMC3Q9UQE7 MIR4790-201ENST00000577799 79 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 MIR4303-201ENST00000581299 66 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AC018638.8-201ENST00000588755 281 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AC019193.3-201ENST00000609144 554 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 MIR8076-201ENST00000611401 83 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AC068205.3-201ENST00000636385 468 ntBASIC1.53□□□□□ -2.16
SMC3Q9UQE7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SMC3Q9UQE7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SMC3Q9UQE7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.52□□□□□ -2.17
SMC3Q9UQE7 AL159152.1-201ENST00000635019 2587 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 U8.10-201ENST00000384260 133 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 MIR32-201ENST00000384965 70 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 MIR300-201ENST00000401138 83 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 RPS26P42-201ENST00000413485 326 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.52□□□□□ -2.17
SMC3Q9UQE7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.52□□□□□ -2.17
SMC3Q9UQE7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SMC3Q9UQE7 MTATP6P13-201ENST00000438531 667 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 AC004386.2-201ENST00000441858 148 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.52□□□□□ -2.17
SMC3Q9UQE7 RNU6-329P-201ENST00000459618 107 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.52□□□□□ -2.17
SMC3Q9UQE7 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 AC026470.2-201ENST00000561492 181 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 MIR5094-201ENST00000578766 85 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 FGF7P1-201ENST00000582820 288 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 MIR4769-201ENST00000584126 77 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMC3Q9UQE7 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
SMC3Q9UQE7 ZNF204P-201ENST00000416749 2397 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SMC3Q9UQE7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
SMC3Q9UQE7 RNU6-222P-201ENST00000362438 107 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 RNU6-727P-201ENST00000363592 107 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 Y_RNA.160-201ENST00000363677 92 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 RNU6-876P-201ENST00000391295 104 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 PDCL2P1-201ENST00000419302 352 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.51□□□□□ -2.17
SMC3Q9UQE7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.51□□□□□ -2.17
SMC3Q9UQE7 RPS29P29-201ENST00000456396 171 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AC010531.2-201ENST00000465012 153 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 RPL7P42-201ENST00000481005 679 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 MTND5P5-201ENST00000503764 376 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.51□□□□□ -2.17
SMC3Q9UQE7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AF235103.2-201ENST00000525753 346 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 POLR3GP2-201ENST00000588366 668 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AC060780.3-201ENST00000589464 80 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 BNIP3P10-201ENST00000605360 577 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AC083806.3-201ENST00000614016 455 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AC093913.1-201ENST00000614178 329 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AC005562.2-201ENST00000618264 111 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 AL359697.1-201ENST00000624879 587 ntBASIC1.51□□□□□ -2.17
SMC3Q9UQE7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RNU6-271P-201ENST00000363858 105 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 SNORD87-201ENST00000364849 89 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RNU6-784P-201ENST00000384330 106 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RNU6-331P-201ENST00000384724 107 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 MIR764-201ENST00000390811 85 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 MTND1P2-201ENST00000430604 821 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AL353997.1-201ENST00000432936 108 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AL353572.1-201ENST00000442490 417 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 MTND1P17-201ENST00000448961 204 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RPL26P26-201ENST00000480251 434 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 Y_RNA.670-201ENST00000516255 105 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RNU6-358P-201ENST00000516564 75 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RNA5SP384-201ENST00000516615 116 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RNU1-92P-201ENST00000517017 135 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 RNU1-117P-201ENST00000517041 158 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 CBX3P8-201ENST00000532412 525 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AL161670.1-201ENST00000554348 137 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 MIR5006-201ENST00000583027 110 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AC124303.1-201ENST00000605703 360 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 AC092794.1-201ENST00000612734 582 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 TCL6_2.1-201ENST00000615162 119 ntBASIC1.5□□□□□ -2.17
SMC3Q9UQE7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.5□□□□□ -2.17
SMC3Q9UQE7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SMC3Q9UQE7 MIR302D-201ENST00000362275 68 ntBASIC1.49□□□□□ -2.17
SMC3Q9UQE7 RNU6-874P-201ENST00000362390 105 ntBASIC1.49□□□□□ -2.17
SMC3Q9UQE7 Y_RNA.157-201ENST00000363638 102 ntBASIC1.49□□□□□ -2.17
SMC3Q9UQE7 RNU6-414P-201ENST00000363705 104 ntBASIC1.49□□□□□ -2.17
SMC3Q9UQE7 RNU6-128P-201ENST00000383976 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms