Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 Y_RNA.703-201ENST00000516846 111 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 AC093908.1-201ENST00000623125 8092 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 RNU6-187P-201ENST00000384139 106 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 Y_RNA.506-201ENST00000384494 102 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 SNORA40.19-201ENST00000390846 128 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 RNU6-763P-201ENST00000390865 106 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AL357139.1-201ENST00000407792 426 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AC092427.1-202ENST00000430569 476 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 MICF-203ENST00000432679 129 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 RNU6-1219P-201ENST00000516143 112 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AC007536.1-201ENST00000533382 349 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 MRPS18CP4-201ENST00000535821 231 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AC008739.3-201ENST00000603262 127 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 MIR7157-201ENST00000635801 60 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 U6.115-201ENST00000636045 103 ntBASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.84□□□□□ -1.79
BRPF3Q9ULD4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 RNU6-125P-201ENST00000384505 107 ntBASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 AC136628.3-201ENST00000521868 290 ntBASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 MIR6075-201ENST00000620782 95 ntBASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 AC021753.1-201ENST00000635724 168 ntBASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 MIR7515-201ENST00000637837 67 ntBASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.83□□□□□ -1.8
BRPF3Q9ULD4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 RNU6-801P-201ENST00000364087 105 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 MIR1294-201ENST00000408503 142 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 RNU6-710P-201ENST00000410424 105 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 AL135790.2-201ENST00000437701 267 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 U8.19-201ENST00000459095 133 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 AC091021.1-201ENST00000468051 388 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 MIR449C-201ENST00000516047 92 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 AC109329.2-201ENST00000519658 482 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 AL078604.3-201ENST00000615580 211 ntBASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRPF3Q9ULD4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 RPL32P35-201ENST00000415214 394 ntBASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 HMGN2P9-201ENST00000476875 229 ntBASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 MIR2682-201ENST00000580305 110 ntBASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.81□□□□□ -1.8
BRPF3Q9ULD4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 RNU1-35P-201ENST00000362782 153 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 RNU1-72P-201ENST00000362976 153 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 Y_RNA.170-201ENST00000363746 110 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 RNU6-944P-201ENST00000364023 107 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 RNVU1-14-201ENST00000384770 164 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 AL357075.1-201ENST00000404107 726 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 AC005326.1-201ENST00000429197 123 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 RNU7-14P-201ENST00000459331 62 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 AP004217.1-201ENST00000480579 346 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 AC012314.7-201ENST00000619693 93 ntBASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
BRPF3Q9ULD4 AL157777.2-201ENST00000258070 137 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 RNU1-109P-201ENST00000383960 147 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 Y_RNA.571-201ENST00000384753 98 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 SNORA26.5-201ENST00000391215 123 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 MIR1185-2-201ENST00000408687 86 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 CST9LP2-201ENST00000437612 320 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 AC083906.5-201ENST00000503722 328 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 SUMO2P18-201ENST00000518873 252 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 U2.22-201ENST00000636441 106 ntBASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BRPF3Q9ULD4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 RNA5SP267-201ENST00000364893 126 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 Y_RNA.361-201ENST00000365515 120 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 MIR23B-201ENST00000384832 97 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms