Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ZNF346Q9UL40 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.71□□□□□ -2.13
ZNF346Q9UL40 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
ZNF346Q9UL40 RNU4-73P-201ENST00000363164 141 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 RNU6-280P-201ENST00000364145 104 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.364-201ENST00000365532 101 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 RNU6-160P-201ENST00000384591 107 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 MIR597-201ENST00000384968 97 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 MIR10B-201ENST00000385011 110 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 MIR586-201ENST00000385035 97 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF346Q9UL40 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 AC004386.2-201ENST00000441858 148 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 MTCO1P44-201ENST00000441935 243 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 NDUFB4P10-201ENST00000452541 359 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 MTCO3P8-201ENST00000453691 755 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 RNU2-34P-201ENST00000516534 121 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.706-201ENST00000516933 99 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 RNU6-1213P-201ENST00000517075 94 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
ZNF346Q9UL40 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF346Q9UL40 C8orf59P2-201ENST00000603441 271 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 AC080078.3-201ENST00000605407 463 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 AL355802.3-201ENST00000607571 545 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.804-201ENST00000615262 101 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
ZNF346Q9UL40 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.71□□□□□ -2.14
ZNF346Q9UL40 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNU6-874P-201ENST00000362390 105 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.48-201ENST00000362710 103 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNU4-79P-201ENST00000362764 141 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNU5E-4P-201ENST00000364931 120 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNU6-890P-201ENST00000384121 107 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.509-201ENST00000384506 99 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AL079342.1-201ENST00000401460 267 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 MIR1283-1-201ENST00000408494 87 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNA5SP504-201ENST00000410676 117 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 MTCO2P27-201ENST00000420740 428 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 SNRPEP8-201ENST00000442866 260 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AL357134.1-201ENST00000445848 426 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AC007395.1-201ENST00000451333 677 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.7□□□□□ -2.14
ZNF346Q9UL40 MTCO3P10-201ENST00000455912 772 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNU7-14P-201ENST00000459331 62 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AP000870.1-201ENST00000472927 406 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AC093303.1-201ENST00000514549 295 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 RNA5SP182-201ENST00000516064 82 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AC004584.2-201ENST00000570407 410 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AC104984.5-201ENST00000586878 94 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.7□□□□□ -2.14
ZNF346Q9UL40 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.7□□□□□ -2.14
ZNF346Q9UL40 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
ZNF346Q9UL40 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.7□□□□□ -2.14
ZNF346Q9UL40 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 ZNF204P-201ENST00000416749 2397 ntBASIC1.7□□□□□ -2.14
ZNF346Q9UL40 LINC02555-201ENST00000563933 1951 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 MTND5P10-201ENST00000603719 1809 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.187-201ENST00000363918 113 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.259-201ENST00000364619 101 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.356-201ENST00000365475 113 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 RNU6-1040P-201ENST00000383974 107 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 MIR559-201ENST00000385188 96 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 EIF1P2-201ENST00000428233 350 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC236972.2-201ENST00000434979 310 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.69□□□□□ -2.14
ZNF346Q9UL40 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.69□□□□□ -2.14
ZNF346Q9UL40 HMGN2P9-201ENST00000476875 229 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 RN7SL274P-201ENST00000492268 272 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC067942.3-201ENST00000512025 362 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 RNU6-470P-201ENST00000515954 104 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 MIR2355-201ENST00000517199 87 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC093027.1-201ENST00000546698 429 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC090617.3-201ENST00000573670 475 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 MIR5006-201ENST00000583027 110 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC130454.1-201ENST00000622948 401 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC091925.1-201ENST00000623204 462 ntBASIC1.69□□□□□ -2.14
ZNF346Q9UL40 AC073544.1-201ENST00000600110 1595 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.68□□□□□ -2.14
ZNF346Q9UL40 Y_RNA.106-201ENST00000363189 100 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 RNU6-23P-201ENST00000363283 107 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 RNU6-873P-201ENST00000363833 107 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 RNU6-281P-201ENST00000384212 103 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 RNA5SP501-201ENST00000410990 112 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 AC007098.1-201ENST00000420122 367 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF346Q9UL40 USP9YP16-201ENST00000430287 407 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 AL353997.1-201ENST00000432936 108 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 USP9YP23-201ENST00000455085 407 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF346Q9UL40 AC022254.1-201ENST00000567857 235 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 MIR3169-201ENST00000578032 83 ntBASIC1.68□□□□□ -2.14
ZNF346Q9UL40 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF346Q9UL40 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms