Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LIMA1Q9UHB6 MTND5P10-201ENST00000603719 1809 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.5-201ENST00000362334 102 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.31-201ENST00000362574 102 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.106-201ENST00000363189 100 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.146-201ENST00000363549 102 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.197-201ENST00000364004 102 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.496-201ENST00000384444 101 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 MIR10B-201ENST00000385011 110 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 MTCO2P12-201ENST00000427426 682 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 MTND2P29-201ENST00000438595 412 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AL137792.2-201ENST00000443484 235 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 HMGN2P9-201ENST00000476875 229 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 RPL17P19-201ENST00000489069 552 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AC008413.1-201ENST00000511864 177 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 RNU6-470P-201ENST00000515954 104 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AP002770.2-201ENST00000543613 532 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AC004584.2-201ENST00000570407 410 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 SNRPGP19-201ENST00000603826 189 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 CYP2C61P-201ENST00000604072 290 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 uc_338.22-201ENST00000622722 187 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 AC008873.1-201ENST00000625051 138 ntBASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.14□□□□□ -2.07
LIMA1Q9UHB6 RNU1-62P-201ENST00000362599 164 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.216-201ENST00000364205 93 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 RNU6-1227P-201ENST00000383981 107 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.463-201ENST00000384271 102 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 MIR586-201ENST00000385035 97 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 RNU1-139P-201ENST00000391307 165 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 MRPS18CP6-201ENST00000423587 223 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AC096920.1-201ENST00000423991 241 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AC114982.1-201ENST00000469402 321 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AC022493.2-201ENST00000506122 481 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 MIR514B-201ENST00000516774 80 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 RNU1-117P-201ENST00000517041 158 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 MIR1273D-201ENST00000577266 86 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 MIR5695-201ENST00000579717 85 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 MIR4435-1-201ENST00000582552 80 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 AC090971.5-201ENST00000621102 293 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 MIR219B-201ENST00000637023 88 ntBASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LIMA1Q9UHB6 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 MTND5P16-201ENST00000460269 1703 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RNU6-874P-201ENST00000362390 105 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.364-201ENST00000365532 101 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RNU6-418P-201ENST00000384035 107 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 SNORA67.2-201ENST00000384300 149 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RNU6-308P-201ENST00000390957 107 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RNA5SP508-201ENST00000411327 119 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AC007098.1-201ENST00000420122 367 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 PMCHL1-202ENST00000423102 261 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AC092423.1-201ENST00000430165 186 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RN7SL274P-201ENST00000492268 272 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RNU6-1170P-201ENST00000515974 106 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RNU6-699P-201ENST00000517081 110 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AL353621.2-201ENST00000605340 133 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AC133104.2-201ENST00000615272 193 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AC091925.1-201ENST00000623204 462 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 AC134503.1-201ENST00000633048 54 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 ZNF355P-201ENST00000427301 3216 ntBASIC2.12□□□□□ -2.07
LIMA1Q9UHB6 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 Y_RNA.112-201ENST00000363250 102 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 RNU6-793P-201ENST00000384233 104 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 AL033519.2-201ENST00000403958 392 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 RNA5SP504-201ENST00000410676 117 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 AC018865.2-201ENST00000423631 129 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 AC074290.1-201ENST00000448883 135 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 SNORA59A-201ENST00000459326 152 ntBASIC2.11□□□□□ -2.07
LIMA1Q9UHB6 RNU7-87P-201ENST00000459343 62 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms