Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.14□□□□□ -2.39
VPS29Q9UBQ0 SNORD70.1-201ENST00000391007 85 ntBASIC0.14□□□□□ -2.39
VPS29Q9UBQ0 AC067940.1-201ENST00000458411 300 ntBASIC0.14□□□□□ -2.39
VPS29Q9UBQ0 RNU6-323P-201ENST00000521915 107 ntBASIC0.14□□□□□ -2.39
VPS29Q9UBQ0 AC025449.1-201ENST00000603896 529 ntBASIC0.14□□□□□ -2.39
VPS29Q9UBQ0 AC092354.1-201ENST00000606057 376 ntBASIC0.14□□□□□ -2.39
VPS29Q9UBQ0 U6.73-201ENST00000619194 103 ntBASIC0.14□□□□□ -2.39
VPS29Q9UBQ0 RNA5SP264-201ENST00000363115 107 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 RNU6-793P-201ENST00000384233 104 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 SNORA67.2-201ENST00000384300 149 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 RNU6-342P-201ENST00000384521 104 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 MIR216A-201ENST00000385063 110 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 MIR140-201ENST00000385282 100 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 RNA5SP494-201ENST00000410653 129 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 MTCYBP10-201ENST00000424905 650 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 AC104850.1-201ENST00000435940 476 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 AC004854.1-201ENST00000440356 349 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 MTCO1P19-201ENST00000443487 500 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 RNA5SP454-201ENST00000517231 127 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 SNRPGP20-201ENST00000604477 205 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 RNU4-5P-201ENST00000607255 135 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 AL133173.2-201ENST00000614270 90 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 SEPT14P17-201ENST00000617978 177 ntBASIC0.13□□□□□ -2.39
VPS29Q9UBQ0 MIR103A2-201ENST00000362154 78 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 RNU5B-2P-201ENST00000363036 113 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 MIR454-201ENST00000390180 115 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 RNA5SP511-201ENST00000410487 115 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 MRPS18CP6-201ENST00000423587 223 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 RNU7-182P-201ENST00000459009 62 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 AC091951.3-201ENST00000504093 246 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 RNU1-117P-201ENST00000517041 158 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 AGGF1P4-201ENST00000568249 801 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 MIR4775-201ENST00000581168 75 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 MIR3192-201ENST00000584920 77 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 AC007014.2-201ENST00000615581 479 ntBASIC0.12□□□□□ -2.39
VPS29Q9UBQ0 Y_RNA.265-201ENST00000364677 108 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 RNU6-1029P-201ENST00000384109 107 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 AL663109.1-201ENST00000411498 844 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 AC093019.1-201ENST00000443135 252 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 AC079781.2-201ENST00000446424 169 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 USP9YP12-201ENST00000450481 570 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 AC007215.1-201ENST00000464893 276 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 RNU7-12P-201ENST00000516030 62 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 AC091304.9-201ENST00000612091 226 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 SEPT14P19-203ENST00000633205 211 ntBASIC0.11□□□□□ -2.39
VPS29Q9UBQ0 RNU6-1127P-201ENST00000384580 107 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 AL355143.1-201ENST00000407101 841 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 MTCO2P3-201ENST00000442543 421 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 RPS29P15-201ENST00000458329 171 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 RPL39P5-202ENST00000512505 151 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 Vault.3-201ENST00000516676 95 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 RNU6-612P-201ENST00000516909 102 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 AC022878.1-201ENST00000530684 149 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 MTCO3P23-201ENST00000561363 289 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 MIR4999-201ENST00000585029 91 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 RNU6-85P-201ENST00000605989 107 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 RNU6-94P-201ENST00000607728 107 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 AC027807.2-201ENST00000616099 408 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
VPS29Q9UBQ0 RNU6-227P-201ENST00000362865 103 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 MIR518E-201ENST00000385252 88 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 RNU6-1106P-201ENST00000390845 107 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 MIR320B2-201ENST00000408479 138 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 RNU2-70P-201ENST00000410718 179 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 snoU109.3-201ENST00000459477 145 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 SNORD27.1-201ENST00000516319 72 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 RNU6-344P-201ENST00000516635 111 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 BNIP3P39-201ENST00000601077 554 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 AL117336.2-201ENST00000602435 335 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 AC139792.3-201ENST00000623525 224 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 SCARNA4-201ENST00000629045 128 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 AC006927.3-201ENST00000638789 384 ntBASIC0.09□□□□□ -2.4
VPS29Q9UBQ0 RNU5E-5P-201ENST00000365379 116 ntBASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 RNU6-906P-201ENST00000384700 70 ntBASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 RNU6-994P-201ENST00000410507 111 ntBASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 RNU6-177P-201ENST00000411257 104 ntBASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 GPR143P-201ENST00000434155 205 ntBASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 USP9YP29-201ENST00000445112 563 ntBASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 MIR6515-201ENST00000619843 57 ntBASIC0.08□□□□□ -2.4
VPS29Q9UBQ0 AL390237.1-201ENST00000404226 1415 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms