Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AC022306.2-201ENST00000617563 647 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 RNU6-727P-201ENST00000363592 107 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 RNU1-96P-201ENST00000364163 162 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 SNORD87-201ENST00000364849 89 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 RNU6-296P-201ENST00000384608 107 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 DPH3P2-201ENST00000422618 250 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 AC245047.4-201ENST00000433189 144 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 MIR5695-201ENST00000579717 85 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 AC126177.8-201ENST00000618339 1015 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 AL590808.1-201ENST00000618696 141 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 AC006001.4-201ENST00000622243 395 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 snoZ196.1-201ENST00000625269 89 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 TPTEP1-208ENST00000636884 213 ntBASIC1.88□□□□□ -2.11
CPSF2Q9P2I0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AL356292.1-201ENST00000283110 373 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 SNORD81.2-201ENST00000365153 76 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 RNU6-1283P-201ENST00000365314 105 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.404-201ENST00000383978 102 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.415-201ENST00000384012 112 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 RNU6-793P-201ENST00000384233 104 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 RNU1-139P-201ENST00000391307 165 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 SNORA3.2-201ENST00000408221 125 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 RNU4-14P-201ENST00000410858 122 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AC016909.1-201ENST00000415916 166 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 USP9YP16-201ENST00000430287 407 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AL353997.1-201ENST00000432936 108 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 USP9YP23-201ENST00000455085 407 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AC116353.2-201ENST00000505332 712 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 RNU6-1114P-201ENST00000516022 107 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AK6P2-201ENST00000549020 471 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 AC064859.1-201ENST00000624741 174 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 MIR338-201ENST00000636369 67 ntBASIC1.87□□□□□ -2.11
CPSF2Q9P2I0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.106-201ENST00000363189 100 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 RNU5F-3P-201ENST00000363767 117 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 RNU6-439P-201ENST00000384188 106 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 HMGN2P34-201ENST00000437647 269 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 RPL23AP63-201ENST00000498752 471 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC093303.1-201ENST00000514549 295 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 SNORA20.3-201ENST00000516880 132 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC105029.1-201ENST00000520250 669 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC116312.1-201ENST00000606841 314 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC099654.5-201ENST00000636479 350 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 AC099654.14-201ENST00000638599 341 ntBASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CPSF2Q9P2I0 RNY1P16-201ENST00000363063 111 ntBASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.390-201ENST00000383932 102 ntBASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 MIR548B-201ENST00000385247 97 ntBASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 CST2P1-201ENST00000425770 87 ntBASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 RNU6-221P-201ENST00000459541 99 ntBASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 PRDX4P1-201ENST00000507189 574 ntBASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF2Q9P2I0 MTND5P16-201ENST00000460269 1703 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNU6-874P-201ENST00000362390 105 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 SNORA33-201ENST00000363664 130 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 U3.8-201ENST00000363675 217 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNU6-331P-201ENST00000384724 107 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNA5SP213-201ENST00000391031 106 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 SNORA75.4-201ENST00000391278 119 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 MIR190B-201ENST00000401119 79 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 AC007098.1-201ENST00000420122 367 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 NDUFB4P10-201ENST00000452541 359 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.635-201ENST00000459041 101 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 SCARNA16.2-201ENST00000516520 172 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNU6-1213P-201ENST00000517075 94 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 RNA5SP437-201ENST00000517249 129 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 AC025647.1-201ENST00000517879 253 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 MZT1P2-201ENST00000604387 248 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 PISRT1.1-201ENST00000616930 107 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.84□□□□□ -2.11
CPSF2Q9P2I0 AC010615.1-201ENST00000594254 1764 ntBASIC1.83□□□□□ -2.12
CPSF2Q9P2I0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.83□□□□□ -2.12
CPSF2Q9P2I0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.83□□□□□ -2.12
CPSF2Q9P2I0 RNU6-281P-201ENST00000384212 103 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 269.8 ms