Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNORD116-9-201ENST00000384000 95 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 SNORD116-3-201ENST00000384287 95 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 SNORD116-7-201ENST00000384404 95 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 SNORD116-5-201ENST00000384462 95 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 MIR300-201ENST00000401138 83 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU6-1068P-201ENST00000410958 103 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AC004866.1-201ENST00000411748 78 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 USP9YP28-201ENST00000435142 589 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AL606517.2-201ENST00000442855 241 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AL031274.1-201ENST00000450334 232 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU7-14P-201ENST00000459331 62 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AC145146.1-201ENST00000496370 254 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU2-34P-201ENST00000516534 121 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU6-165P-201ENST00000517170 99 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AL022345.2-201ENST00000606307 135 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 AC078883.4-201ENST00000623218 367 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 MTND4P5-201ENST00000435821 1374 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 RNA5SP257-201ENST00000363023 116 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.399-201ENST00000383955 105 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 RNU6-418P-201ENST00000384035 107 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 RN7SKP142-201ENST00000411236 328 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AC090960.1-201ENST00000421072 306 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.59□□□□□ -2.32
CCDC88CQ9P219 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.59□□□□□ -2.32
CCDC88CQ9P219 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.59□□□□□ -2.32
CCDC88CQ9P219 RNU7-187P-201ENST00000458985 68 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 SRRM1P2-201ENST00000464531 1192 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.654-201ENST00000497848 106 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AK3P2-201ENST00000507976 429 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 MTND1P22-201ENST00000510572 951 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 RNU2-69P-201ENST00000516061 100 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 RNU6-314P-201ENST00000516574 104 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AC136932.1-201ENST00000574771 208 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 MIR4709-201ENST00000577272 72 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 MIR5692C1-201ENST00000585309 91 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AC010620.1-201ENST00000601088 1102 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AL162424.1-201ENST00000602325 221 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AL133215.3-201ENST00000609801 448 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AL158063.1-201ENST00000615349 536 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 AL354950.2-201ENST00000617939 290 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.30-201ENST00000362572 97 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RNU6-1120P-201ENST00000362988 108 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RNU6-715P-201ENST00000365204 103 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RNU6-282P-201ENST00000365357 103 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RNU6-45P-201ENST00000384471 107 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.504-201ENST00000384481 104 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RNU6-417P-201ENST00000384712 107 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 ZNF885P-201ENST00000420174 1098 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RAB28P5-201ENST00000427490 651 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC073464.1-201ENST00000429823 534 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC88CQ9P219 MTCO2P7-201ENST00000446518 666 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC009237.7-201ENST00000447357 229 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC073415.1-201ENST00000449240 153 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RPL23AP75-201ENST00000491601 451 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 RNU6-323P-201ENST00000521915 107 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC024995.1-201ENST00000523014 93 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC019288.1-201ENST00000557918 224 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC008088.1-201ENST00000580993 280 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC017083.3-201ENST00000609955 700 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 AC005609.4-201ENST00000625071 447 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 snoZ196.1-201ENST00000625269 89 ntBASIC0.58□□□□□ -2.32
CCDC88CQ9P219 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CCDC88CQ9P219 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.2-201ENST00000362330 96 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.167-201ENST00000363735 109 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU6-534P-201ENST00000364877 106 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 SNORA67.2-201ENST00000384300 149 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU6-248P-201ENST00000410720 107 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AL663109.1-201ENST00000411498 844 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 C1DP2-201ENST00000418167 426 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC245047.3-201ENST00000429428 127 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC083904.1-201ENST00000487828 231 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNA5SP401-201ENST00000515920 127 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 MTND1P35-201ENST00000526739 508 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms