Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 CKS1BP7-201ENST00000522230 235 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 AP003327.1-201ENST00000529684 127 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 AC108081.1-201ENST00000604358 221 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 AC068700.1-201ENST00000565862 3754 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 AC010733.2-201ENST00000589496 5702 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 FAM35CP-201ENST00000554755 2470 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 AC022336.2-201ENST00000568966 2538 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.293-201ENST00000364908 93 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 AP002088.1-201ENST00000382740 395 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 SNORA26.2-201ENST00000390922 122 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 SNORA26.5-201ENST00000391215 123 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 MIR208B-201ENST00000401172 77 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 MIR888-201ENST00000401186 77 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 RPL26P9-201ENST00000457466 433 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.651-201ENST00000459380 103 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 AC006483.1-201ENST00000487308 313 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 SNORD33.1-201ENST00000516213 88 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 RNU2-56P-201ENST00000516826 190 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 AL033523.1-201ENST00000605153 153 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 AC068647.2-201ENST00000637380 353 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 ADAM3A-203ENST00000461344 2157 ntBASIC3.61□□□□□ -1.83
LMCD1Q9NZU5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AL021368.2-201ENST00000606125 5352 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 MIR450A1-201ENST00000362262 91 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 RNU6-1048P-201ENST00000364054 107 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 RNU6-454P-201ENST00000364292 107 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.251-201ENST00000364551 99 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 U8.6-201ENST00000364939 135 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 RNU6-245P-201ENST00000384020 107 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 SNORA26.3-201ENST00000391119 136 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AC010401.1-201ENST00000463867 348 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AC103975.1-201ENST00000482506 483 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 RPS29P24-201ENST00000486345 171 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.677-201ENST00000516401 85 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 RNU6-928P-201ENST00000516876 104 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AC109810.1-201ENST00000534066 224 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 AL162713.1-201ENST00000604480 262 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 U6.95-201ENST00000636931 70 ntBASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMCD1Q9NZU5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.24-201ENST00000362508 103 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RNU6-235P-201ENST00000362644 107 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RNU6-103P-201ENST00000363686 107 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RNU6-805P-201ENST00000365643 106 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 SNORA18.3-201ENST00000384122 132 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AP000567.1-201ENST00000406413 156 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AC099548.1-201ENST00000421443 426 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AL139281.1-201ENST00000422120 335 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AL353705.1-201ENST00000433468 480 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AL135790.2-201ENST00000437701 267 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AC025750.2-201ENST00000442609 450 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RNU6-453P-201ENST00000516819 85 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RNU6-762P-201ENST00000517107 102 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 RNU2-12P-201ENST00000517216 168 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AC090897.2-201ENST00000581715 130 ntBASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMCD1Q9NZU5 AC008555.8-201ENST00000623602 2168 ntBASIC3.59□□□□□ -1.84
LMCD1Q9NZU5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMCD1Q9NZU5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 RNU1-62P-201ENST00000362599 164 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 Y_RNA.294-201ENST00000364916 102 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 SNORD37.2-201ENST00000391075 66 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 RNA5SP390-201ENST00000410191 113 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 HMGN2P10-201ENST00000448085 265 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 RNU6-537P-201ENST00000517277 103 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 AC136628.3-201ENST00000521868 290 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 NACAP3-201ENST00000552100 481 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 AC021739.1-201ENST00000559631 174 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 MIR3162-201ENST00000581818 82 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 AC013791.1-201ENST00000616619 62 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.58□□□□□ -1.84
LMCD1Q9NZU5 SNORD98-201ENST00000636377 67 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms