Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL356095.1-201ENST00000417217 199 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 GOT2P5-201ENST00000433995 546 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 AC006011.1-201ENST00000442758 349 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 RN7SL585P-201ENST00000470538 280 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 AC145146.1-201ENST00000496370 254 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 AC083906.5-201ENST00000503722 328 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 MIR2681-201ENST00000581814 105 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 AL365205.2-201ENST00000594586 68 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 AC008739.2-201ENST00000597006 317 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 uc_338.4-201ENST00000616635 176 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 MAPK10-322ENST00000641485 4530 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 AP003122.5-201ENST00000527668 3766 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-529P-201ENST00000363383 104 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-440P-201ENST00000390882 105 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 AL355796.1-201ENST00000406706 323 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 AC109327.2-201ENST00000448339 378 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 AL133547.1-201ENST00000448546 220 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 RPL27AP5-201ENST00000469428 449 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 COX6CP6-201ENST00000490840 228 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-113P-201ENST00000516653 101 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-158P-201ENST00000517104 100 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 MIR5047-201ENST00000579212 100 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 RPS15AP11-201ENST00000594193 385 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 uc_338.14-201ENST00000613162 166 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 MIR7151-201ENST00000617477 60 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 AC002064.3-201ENST00000623448 346 ntBASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CUEDC1Q9NWM3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.91-201ENST00000363042 107 ntBASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 MIR488-201ENST00000365739 83 ntBASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 MIR450A2-201ENST00000385022 100 ntBASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 HMGN2P31-201ENST00000432430 273 ntBASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 MIR7702-201ENST00000621931 59 ntBASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CUEDC1Q9NWM3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.96□□□□□ -1.77
CUEDC1Q9NWM3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CUEDC1Q9NWM3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
CUEDC1Q9NWM3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 Y_RNA.219-201ENST00000364232 113 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 RNU6-1152P-201ENST00000384576 107 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 AL445584.1-201ENST00000431451 330 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 RPL39P34-201ENST00000477141 156 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 AC026241.1-201ENST00000517873 2142 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 MIR4662B-201ENST00000579498 81 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 AL161756.2-201ENST00000604597 246 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 MIR6875-201ENST00000617506 72 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 MIR2052-201ENST00000636055 55 ntBASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
CUEDC1Q9NWM3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 AL589743.1-201ENST00000551932 2712 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 RNA5SP130-201ENST00000364431 114 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 RNU6-573P-201ENST00000383938 106 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 Y_RNA.549-201ENST00000384657 102 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 YME1L1P1-201ENST00000429435 297 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 CALM2P4-201ENST00000430810 426 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 RN7SL330P-201ENST00000469709 307 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 AC025554.1-201ENST00000505641 188 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 RNU7-143P-201ENST00000516781 65 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 MIR5684-201ENST00000585074 65 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 AC020914.4-201ENST00000597690 277 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 AC069200.1-201ENST00000609511 323 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 MIR6867-201ENST00000610636 67 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 Y_RNA.818-201ENST00000618813 71 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 AC058791.1-201ENST00000608412 3198 ntBASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CUEDC1Q9NWM3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms