Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL049545.1-201ENST00000401856 572 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 MIR1827-201ENST00000408549 66 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 MTCO2P8-201ENST00000412213 658 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 AP1B1P2-201ENST00000416196 106 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SNORD65B-201ENST00000459126 73 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 COX6CP14-201ENST00000469580 174 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 AC098799.1-201ENST00000504752 800 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SNORA70.24-201ENST00000517233 118 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 ELOCP32-201ENST00000548625 324 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SCOCP1-201ENST00000554676 349 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 MIR3973-201ENST00000579824 107 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 MIR3682-201ENST00000581338 84 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 MIR98-201ENST00000606724 119 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 U2.17-201ENST00000611454 95 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 AC137590.2-201ENST00000619709 240 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SNORA1B-201ENST00000362535 133 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-784P-201ENST00000384330 106 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AL593851.1-201ENST00000426171 157 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 RNU7-180P-201ENST00000459240 63 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 RPL23AP75-201ENST00000491601 451 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 CCDC34P1-201ENST00000507441 517 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-341P-201ENST00000516973 96 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-58P-201ENST00000517143 103 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 MRPS36P3-201ENST00000519284 130 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AF235103.2-201ENST00000525753 346 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AC008015.1-201ENST00000555505 465 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 MTND1P8-201ENST00000571424 950 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AC100812.1-201ENST00000607622 580 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 AC004223.4-201ENST00000612426 332 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 SCARNA4.1-201ENST00000628597 123 ntBASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.08□□□□□ -2.4
CDC42SE1Q9NRR8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 MIR103A1-201ENST00000362165 78 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU4-82P-201ENST00000362443 140 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 SNORA25.3-201ENST00000363205 127 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-833P-201ENST00000363486 107 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-17P-201ENST00000384245 107 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1297P-201ENST00000384415 104 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-18P-201ENST00000384527 107 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1106P-201ENST00000390845 107 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 MIR320B2-201ENST00000408479 138 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 Z99497.1-201ENST00000421282 135 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 Z98949.2-201ENST00000440996 144 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC091021.1-201ENST00000468051 388 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 MTND2P14-201ENST00000482139 351 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC005178.1-201ENST00000508392 440 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC097462.1-201ENST00000514125 324 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-113P-201ENST00000516653 101 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1116P-201ENST00000517269 99 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AP003461.1-201ENST00000528866 78 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC023157.2-201ENST00000540596 141 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 CPDP1-201ENST00000579660 283 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AL136317.1-201ENST00000612653 226 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC006435.5-201ENST00000624486 112 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 AC009161.2-201ENST00000624626 138 ntBASIC0.07□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1266P-201ENST00000362794 105 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 RNA5SP482-201ENST00000391269 118 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 SNORD111-201ENST00000408139 94 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 AL356010.1-201ENST00000456364 102 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 RPS29P21-201ENST00000496272 170 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 RNU7-41P-201ENST00000515917 61 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 SNORA14.1-201ENST00000516113 141 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-229P-201ENST00000516614 102 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 RNA5SP54-201ENST00000516951 92 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 MTND1P35-201ENST00000526739 508 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 AC007684.1-201ENST00000609671 477 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 HULC.1-201ENST00000612720 240 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 AP001506.1-201ENST00000615444 211 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 FER-210ENST00000628534 558 ntTSL 5 BASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 MTND4P12-201ENST00000498999 1377 ntBASIC0.06□□□□□ -2.4
CDC42SE1Q9NRR8 RNA5SP347-201ENST00000362445 119 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-369P-201ENST00000362515 102 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms