Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 SCARNA18-201ENST00000459004 134 ntBASIC-1.67□□□□□ -2.68
SMCO4Q9NRQ5 AC026616.1-201ENST00000523157 525 ntBASIC-1.67□□□□□ -2.68
SMCO4Q9NRQ5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.67□□□□□ -2.68
SMCO4Q9NRQ5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.67□□□□□ -2.68
SMCO4Q9NRQ5 RNU6-545P-201ENST00000362681 104 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 RNU6-78P-201ENST00000362897 107 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 SNORA75B-201ENST00000384053 137 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 MIR544A-201ENST00000384855 91 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 MIR300-201ENST00000401138 83 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 AC007547.1-201ENST00000462177 490 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 SNORA14.1-201ENST00000516113 141 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 RNU6-948P-201ENST00000516374 107 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 SNORA27.4-201ENST00000516650 95 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 AC006927.4-201ENST00000639187 543 ntBASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.68□□□□□ -2.68
SMCO4Q9NRQ5 RNU6-934P-201ENST00000365154 107 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 AC109327.2-201ENST00000448339 378 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 SNORA18.7-201ENST00000516910 131 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 Z99289.3-201ENST00000605586 594 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 AL445264.1-201ENST00000621719 171 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 AC006001.4-201ENST00000622243 395 ntBASIC-1.69□□□□□ -2.68
SMCO4Q9NRQ5 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 RNU6-343P-201ENST00000364709 104 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 SNORD32A-201ENST00000364805 84 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 RNA5SP117-201ENST00000365294 118 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 MIR873-201ENST00000401120 77 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 AC244250.2-201ENST00000418731 148 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 RNU6-953P-201ENST00000459154 107 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 MTND1P36-201ENST00000522384 936 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 AC063944.3-201ENST00000609969 533 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 MTND5P33-201ENST00000571250 1450 ntBASIC-1.7□□□□□ -2.68
SMCO4Q9NRQ5 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 AL133153.1-201ENST00000557756 303 ntBASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 MIR4771-2-201ENST00000577758 74 ntBASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 MIR4771-1-201ENST00000582617 74 ntBASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 MIR4676-201ENST00000583078 72 ntBASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 AC104458.1-201ENST00000608243 463 ntBASIC-1.71□□□□□ -2.68
SMCO4Q9NRQ5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 RNU4-56P-201ENST00000364700 142 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 MIR10A-201ENST00000385043 110 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 MIR1283-1-201ENST00000408494 87 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 RPL21P38-201ENST00000418090 167 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 MTCO2P23-201ENST00000425216 680 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 HSFY7P-201ENST00000432672 318 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 HSFY8P-201ENST00000437934 318 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 MIR4753-201ENST00000585119 83 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 AC125232.2-201ENST00000592457 143 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 AC006380.1-201ENST00000603598 186 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 AC245008.1-201ENST00000608123 476 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 AC091304.9-201ENST00000612091 226 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 FRG1KP-201ENST00000623592 341 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 AC090617.9-201ENST00000623751 147 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 SCARNA4-201ENST00000629045 128 ntBASIC-1.72□□□□□ -2.68
SMCO4Q9NRQ5 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 MIR217-201ENST00000384817 110 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 MIR520C-201ENST00000385005 87 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 MTND3P20-201ENST00000407663 186 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 MIR1185-2-201ENST00000408687 86 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 MIR1302-7-201ENST00000408841 72 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 FCF1P9-201ENST00000412546 282 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 SUMO1P2-201ENST00000452524 304 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 RPS29P27-201ENST00000463711 170 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 AC090572.1-201ENST00000519251 160 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 AL139286.2-201ENST00000606838 396 ntBASIC-1.73□□□□□ -2.69
SMCO4Q9NRQ5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 MIR501-201ENST00000390204 84 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 MTND3P17-201ENST00000416968 344 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 AL953862.1-201ENST00000423016 168 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 AC015818.7-201ENST00000428754 109 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 AC087499.7-201ENST00000441958 109 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 MIR3923-201ENST00000579521 83 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 MIR548AX-201ENST00000580117 73 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.74□□□□□ -2.69
SMCO4Q9NRQ5 RNA5SP205-201ENST00000364653 136 ntBASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 NDUFB1P2-201ENST00000449477 176 ntBASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 RNU7-94P-201ENST00000459576 63 ntBASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 AC016632.1-201ENST00000503994 196 ntBASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 AC093303.1-201ENST00000514549 295 ntBASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 MIR2115-201ENST00000516657 100 ntBASIC-1.75□□□□□ -2.69
SMCO4Q9NRQ5 RNU6-914P-201ENST00000516749 109 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms