Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RNU6-727P-201ENST00000363592 107 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RNU6-271P-201ENST00000363858 105 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RNU6-1019P-201ENST00000364424 107 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 Y_RNA.533-201ENST00000384596 114 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RNU6-417P-201ENST00000384712 107 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 MIR520A-201ENST00000384862 85 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RNA5SP467-201ENST00000391274 118 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RNU2-7P-201ENST00000410794 178 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.12□□□□□ -2.23
HMG20AQ9NP66 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.12□□□□□ -2.23
HMG20AQ9NP66 UBE2V1P8-201ENST00000437166 265 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 MTATP6P13-201ENST00000438531 667 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 AC073910.1-201ENST00000445047 438 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RNU6-948P-201ENST00000516374 107 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 AC027288.2-201ENST00000553028 243 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 AL161670.1-201ENST00000554348 137 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 SNRPGP20-201ENST00000604477 205 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.12□□□□□ -2.23
HMG20AQ9NP66 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.12□□□□□ -2.23
HMG20AQ9NP66 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMG20AQ9NP66 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 AC100821.1-201ENST00000523153 2479 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RNU6-873P-201ENST00000363833 107 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 SNORA63D-201ENST00000364359 132 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 Y_RNA.287-201ENST00000364853 94 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RNU4-9P-201ENST00000364951 139 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 Y_RNA.453-201ENST00000384223 109 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RNU6-1235P-201ENST00000384559 107 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RNU6-373P-201ENST00000411247 98 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 USP9YP30-201ENST00000430729 455 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 TOMM22P2-201ENST00000430735 237 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 MTCO3P29-201ENST00000432119 779 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 DAP3P1-201ENST00000441522 278 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RNU1-123P-201ENST00000458950 160 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RNU6-498P-201ENST00000459468 107 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RPL26P26-201ENST00000480251 434 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 AC025465.3-201ENST00000510570 311 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 ACA59.1-201ENST00000515966 143 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 RNU4-49P-201ENST00000516080 140 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 AP003033.1-201ENST00000527244 415 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 AL078596.1-201ENST00000624856 447 ntBASIC1.11□□□□□ -2.23
HMG20AQ9NP66 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMG20AQ9NP66 MTND4P12-201ENST00000498999 1377 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 snoU2-30.2-201ENST00000362805 70 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 RNU6-414P-201ENST00000363705 104 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 RNU6-457P-201ENST00000363999 107 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 Y_RNA.301-201ENST00000364990 103 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 Y_RNA.319-201ENST00000365138 92 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 Y_RNA.415-201ENST00000384012 112 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 RNU6-842P-201ENST00000384269 107 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 MIR586-201ENST00000385035 97 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.1□□□□□ -2.23
HMG20AQ9NP66 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.1□□□□□ -2.23
HMG20AQ9NP66 HMGN1P13-201ENST00000505795 138 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.1□□□□□ -2.23
HMG20AQ9NP66 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 Y_RNA.655-201ENST00000515919 96 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 SNORA25.14-201ENST00000516481 132 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 RNU1-92P-201ENST00000517017 135 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 RNA5SP454-201ENST00000517231 127 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.1□□□□□ -2.23
HMG20AQ9NP66 MIR5696-201ENST00000578474 85 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.1□□□□□ -2.23
HMG20AQ9NP66 AL353149.1-201ENST00000610667 244 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 AC009248.2-201ENST00000619826 254 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 AL133216.2-202ENST00000634512 349 ntBASIC1.1□□□□□ -2.23
HMG20AQ9NP66 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMG20AQ9NP66 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMG20AQ9NP66 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 MIR764-201ENST00000390811 85 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 MIR1267-201ENST00000408723 78 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 CST2P1-201ENST00000425770 87 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AL606517.2-201ENST00000442855 241 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 snoU13.9-201ENST00000458927 103 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AC069439.1-201ENST00000494739 167 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AC011352.1-201ENST00000512300 793 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 RNU2-34P-201ENST00000516534 121 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 RNU6-344P-201ENST00000516635 111 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 RNU6-566P-201ENST00000516790 107 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AC025647.1-201ENST00000517879 253 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.09□□□□□ -2.23
HMG20AQ9NP66 MIR6128-201ENST00000615528 109 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 MIR8063-201ENST00000621930 81 ntBASIC1.09□□□□□ -2.23
HMG20AQ9NP66 AC008873.1-201ENST00000625051 138 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms