Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 UBE2V2P2-201ENST00000587677 504 ntBASIC1.6□□□□□ -2.15
ELL3Q9HB65 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ELL3Q9HB65 RBM11P1-201ENST00000604951 799 ntBASIC1.6□□□□□ -2.15
ELL3Q9HB65 AL132765.2-201ENST00000610812 351 ntBASIC1.6□□□□□ -2.15
ELL3Q9HB65 AC083806.3-201ENST00000614016 455 ntBASIC1.6□□□□□ -2.15
ELL3Q9HB65 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
ELL3Q9HB65 AL159152.1-201ENST00000635019 2587 ntBASIC1.6□□□□□ -2.15
ELL3Q9HB65 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ELL3Q9HB65 SNORD114-1-201ENST00000362705 72 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 RNU6-862P-201ENST00000362804 105 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 Y_RNA.132-201ENST00000363421 102 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 Y_RNA.415-201ENST00000384012 112 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 RNU6-541P-201ENST00000384709 110 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 MIR300-201ENST00000401138 83 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 AC019129.1-201ENST00000403786 261 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 AC016909.1-201ENST00000415916 166 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 HMGN2P19-201ENST00000425149 265 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 USMG5P1-201ENST00000425964 177 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.59□□□□□ -2.15
ELL3Q9HB65 HMGB3P17-201ENST00000504195 649 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 RNU6-344P-201ENST00000516635 111 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 RNU6-856P-201ENST00000516959 98 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.59□□□□□ -2.15
ELL3Q9HB65 SUB1P4-201ENST00000566062 339 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.59□□□□□ -2.15
ELL3Q9HB65 MTND4LP32-201ENST00000636111 270 ntBASIC1.59□□□□□ -2.15
ELL3Q9HB65 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
ELL3Q9HB65 SNORA33-201ENST00000363664 130 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 Y_RNA.490-201ENST00000384413 102 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 SNORD116-29-201ENST00000384516 83 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 Y_RNA.557-201ENST00000384680 107 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR586-201ENST00000385035 97 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR190B-201ENST00000401119 79 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.58□□□□□ -2.16
ELL3Q9HB65 EIF1P2-201ENST00000428233 350 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC010095.1-201ENST00000443543 144 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AL357134.1-201ENST00000445848 426 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 RNU7-57P-201ENST00000459540 60 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC134698.4-201ENST00000523451 826 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.58□□□□□ -2.16
ELL3Q9HB65 FRG2DP-202ENST00000566967 323 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC022254.1-201ENST00000567857 235 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC024614.2-201ENST00000577584 372 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR5094-201ENST00000578766 85 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR5695-201ENST00000579717 85 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR4753-201ENST00000585119 83 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC125232.2-201ENST00000592457 143 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR1244-1-201ENST00000612829 85 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC005296.1-201ENST00000616145 209 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC126177.8-201ENST00000618339 1015 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC092794.2-201ENST00000620933 563 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR1244-3-201ENST00000635744 85 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AC068205.3-201ENST00000636385 468 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR1244-2-201ENST00000636449 85 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 MIR1244-4-202ENST00000636813 85 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 AP006437.1-201ENST00000641440 3685 ntBASIC1.58□□□□□ -2.16
ELL3Q9HB65 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
ELL3Q9HB65 RNU6-137P-201ENST00000363680 108 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 RNU6-99P-201ENST00000364721 107 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 RNU6-245P-201ENST00000384020 107 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ELL3Q9HB65 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.57□□□□□ -2.16
ELL3Q9HB65 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC244636.1-201ENST00000421152 228 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 RPL23AP6-201ENST00000446637 472 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 Y_RNA.635-201ENST00000459041 101 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 UBL5P3-201ENST00000475112 231 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC110588.1-201ENST00000559699 137 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC005786.1-201ENST00000588553 154 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 CYP2C61P-201ENST00000604072 290 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC113139.1-201ENST00000605049 239 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC025253.1-201ENST00000613623 543 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AL357075.2-201ENST00000614906 189 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC104260.1-201ENST00000616660 539 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 PISRT1.1-201ENST00000616930 107 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC008873.1-201ENST00000625051 138 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.57□□□□□ -2.16
ELL3Q9HB65 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.57□□□□□ -2.16
ELL3Q9HB65 AC245060.5-201ENST00000610778 3293 ntBASIC1.57□□□□□ -2.16
ELL3Q9HB65 RNU1-62P-201ENST00000362599 164 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 RNA5SP361-201ENST00000362686 118 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 RNU6-890P-201ENST00000384121 107 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 Y_RNA.529-201ENST00000384586 119 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 RNU6-296P-201ENST00000384608 107 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 RNU1-139P-201ENST00000391307 165 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 RNU6-57P-201ENST00000411348 103 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 AC245047.4-201ENST00000433189 144 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.56□□□□□ -2.16
ELL3Q9HB65 AC011406.1-201ENST00000512440 370 ntBASIC1.56□□□□□ -2.16
ELL3Q9HB65 RNU6-559P-201ENST00000516151 98 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms