Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC010531.2-201ENST00000465012 153 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 AL049873.1-201ENST00000480540 376 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 RNU6-856P-201ENST00000516959 98 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 AL050343.2-201ENST00000607338 280 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 AC087588.2-201ENST00000617667 426 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
BRF2Q9HAW0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
BRF2Q9HAW0 MIR340-201ENST00000362125 95 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.535-201ENST00000384612 99 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AC096920.1-201ENST00000423991 241 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AL353689.1-201ENST00000438895 199 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 RNA5SP281-201ENST00000516504 135 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 CYCSP23-201ENST00000519781 313 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AC125232.2-201ENST00000592457 143 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AC083806.3-201ENST00000614016 455 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 U2.1-201ENST00000618978 145 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AL162373.1-201ENST00000620433 407 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AL160413.1-201ENST00000622780 310 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
BRF2Q9HAW0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 AL159152.1-201ENST00000635019 2587 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
BRF2Q9HAW0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
BRF2Q9HAW0 RNU6-1115P-201ENST00000362490 106 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.39-201ENST00000362620 98 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 RNA5SP361-201ENST00000362686 118 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.197-201ENST00000364004 102 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 AC096644.2-201ENST00000429278 159 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 AL080274.1-201ENST00000605565 220 ntBASIC2.11□□□□□ -2.07
BRF2Q9HAW0 MIR369-201ENST00000362155 70 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 U3.8-201ENST00000363675 217 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.813-201ENST00000364639 102 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 RNU4-42P-201ENST00000364738 142 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 MIR329-1-201ENST00000385028 80 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 SNORA48.1-201ENST00000390879 135 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 RNA5SP213-201ENST00000391031 106 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
BRF2Q9HAW0 SNORA11.4-201ENST00000408823 129 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
BRF2Q9HAW0 RN7SKP49-201ENST00000516675 260 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.1□□□□□ -2.07
BRF2Q9HAW0 SNRPGP18-201ENST00000553000 214 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AC006600.1-201ENST00000572529 153 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AL109918.3-201ENST00000603072 338 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AC092447.9-201ENST00000603395 144 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AC006001.4-201ENST00000622243 395 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
BRF2Q9HAW0 AC006026.1-201ENST00000444025 1803 ntBASIC2.1□□□□□ -2.07
BRF2Q9HAW0 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 RNA5SP289-201ENST00000362332 137 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.445-201ENST00000384168 102 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 SNORA67.2-201ENST00000384300 149 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 RNA5SP504-201ENST00000410676 117 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 RPS20P15-201ENST00000412792 311 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 PCNPP5-201ENST00000452246 481 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 RPL23AP3-201ENST00000453844 468 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
BRF2Q9HAW0 SNORD53-201ENST00000579969 78 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 AC006157.1-201ENST00000611750 366 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 AL138825.1-201ENST00000618587 192 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 snoZ196.1-201ENST00000625269 89 ntBASIC2.09□□□□□ -2.07
BRF2Q9HAW0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRF2Q9HAW0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRF2Q9HAW0 RNU6-1301P-201ENST00000362724 104 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.252-201ENST00000364556 101 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 MIR548B-201ENST00000385247 97 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 RNA5SP212-201ENST00000391223 107 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 MIR1253-201ENST00000408273 105 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 SNORD12B-201ENST00000410433 91 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 AC008134.1-201ENST00000420943 193 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 YWHAEP4-201ENST00000505390 198 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.08□□□□□ -2.08
BRF2Q9HAW0 MIR4672-201ENST00000583126 81 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 VN1R91P-201ENST00000594377 169 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 AL353149.1-201ENST00000610667 244 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms