Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 TRBVA-201ENST00000498804 316 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 AC025465.3-201ENST00000510570 311 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 RNA5SP437-201ENST00000517249 129 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 AC109635.3-201ENST00000529536 185 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 AC069114.2-201ENST00000604699 304 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 SCARNA4-201ENST00000629045 128 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 MIR548B-201ENST00000385247 97 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 AL117342.1-201ENST00000404861 406 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 HSPE1P9-201ENST00000440046 311 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 NFU1P2-201ENST00000448700 469 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 AC079354.2-201ENST00000453523 154 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 HMGN2P9-201ENST00000476875 229 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 AC011406.1-201ENST00000512440 370 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 RNU6-256P-201ENST00000516747 97 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 RNU1-117P-201ENST00000517041 158 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 SNRPGP20-201ENST00000604477 205 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 AC090617.10-201ENST00000624308 134 ntBASIC1.5□□□□□ -2.17
RPAP3Q9H6T3 MTND4P5-201ENST00000435821 1374 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 RNU6-623P-201ENST00000363143 105 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.402-201ENST00000383972 102 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 RNU6-975P-201ENST00000384296 105 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 RNU6-306P-201ENST00000384617 107 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 MIR517A-201ENST00000385001 87 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 ZNF885P-201ENST00000420174 1098 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AC245517.4-201ENST00000448601 281 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 FO393415.2-201ENST00000480085 343 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 MTCO2P30-201ENST00000503662 364 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AC008269.2-201ENST00000561915 1105 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 MIR3942-201ENST00000585264 109 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AC080078.3-201ENST00000605407 463 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AC097065.2-201ENST00000608159 533 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AC137590.2-201ENST00000619709 240 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AC006001.4-201ENST00000622243 395 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AL359697.1-201ENST00000624879 587 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 AC095038.3-201ENST00000634439 195 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 BX322639.1-202ENST00000423987 2213 ntBASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPAP3Q9H6T3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.3-201ENST00000362331 103 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.100-201ENST00000363141 102 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 RNU1-22P-201ENST00000363334 158 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.414-201ENST00000384011 101 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 MIR520A-201ENST00000384862 85 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 MIR32-201ENST00000384965 70 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 MIR518E-201ENST00000385252 88 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 AC099513.1-201ENST00000490423 301 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 HMGN1P13-201ENST00000505795 138 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 RNU6-948P-201ENST00000516374 107 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 RNU2-34P-201ENST00000516534 121 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 POLR3GP2-201ENST00000588366 668 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 AC006504.8-201ENST00000621046 635 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 AC100810.6-201ENST00000638068 285 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 AC010615.1-201ENST00000594254 1764 ntBASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.48□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.9-201ENST00000362354 101 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 RNY4P14-201ENST00000363656 96 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 RNU4-12P-201ENST00000365233 139 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 RNU6-331P-201ENST00000384724 107 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 RNU6-498P-201ENST00000459468 107 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 TPRKBP2-201ENST00000565969 475 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 EIF1P4-201ENST00000572664 335 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 MIR4452-201ENST00000583004 71 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 AC019193.3-201ENST00000609144 554 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 AL353149.1-201ENST00000610667 244 ntBASIC1.47□□□□□ -2.17
RPAP3Q9H6T3 AC100821.1-201ENST00000523153 2479 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 RNU6-414P-201ENST00000363705 104 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 SNORD114-22-201ENST00000365423 72 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 SNORD116-11-201ENST00000383882 92 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
RPAP3Q9H6T3 MIR586-201ENST00000385035 97 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms