Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AC103851.1-201ENST00000506833 274 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 RNU6-1016P-201ENST00000516689 94 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 RNU1-92P-201ENST00000517017 135 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 CBX3P8-201ENST00000532412 525 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 MIR5701-3-201ENST00000578890 82 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 MIR4273-201ENST00000582824 84 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 MIR5701-1-201ENST00000585138 82 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AC005034.5-201ENST00000604219 466 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 MIR5701-2-201ENST00000615634 82 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 ZNF299P-201ENST00000406845 1804 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 RNA5SP432-201ENST00000362480 116 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 RNU6-593P-201ENST00000364716 112 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.482-201ENST00000384377 111 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RNF41Q9H4P4 BTF3P4-201ENST00000418852 495 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 PRDX4P1-201ENST00000507189 574 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 RRN3P3-201ENST00000549207 578 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 MIR5006-201ENST00000583027 110 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 AC005014.2-201ENST00000607795 599 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
RNF41Q9H4P4 ZNF204P-201ENST00000416749 2397 ntBASIC1.64□□□□□ -2.15
RNF41Q9H4P4 RNU6-137P-201ENST00000363680 108 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 RNU6-438P-201ENST00000365561 103 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.404-201ENST00000383978 102 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 SNORA8-201ENST00000384574 139 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.561-201ENST00000384694 100 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 MIR1283-1-201ENST00000408494 87 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 RNA5SP504-201ENST00000410676 117 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AL158823.1-201ENST00000418441 478 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AC007395.1-201ENST00000451333 677 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AC116353.2-201ENST00000505332 712 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 RNVU1-2-201ENST00000516326 135 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 RNA5SP54-201ENST00000516951 92 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AP005660.1-201ENST00000522972 293 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.63□□□□□ -2.15
RNF41Q9H4P4 MIR4421-201ENST00000578133 69 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 SNRPGP20-201ENST00000604477 205 ntBASIC1.63□□□□□ -2.15
RNF41Q9H4P4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.63□□□□□ -2.15
RNF41Q9H4P4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.63□□□□□ -2.15
RNF41Q9H4P4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
RNF41Q9H4P4 RNU6-23P-201ENST00000363283 107 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.303-201ENST00000364998 94 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RNF41Q9H4P4 RNU6-418P-201ENST00000384035 107 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.490-201ENST00000384413 102 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 MIR153-2-201ENST00000385225 87 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 SNORA48.1-201ENST00000390879 135 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 RNU6-159P-201ENST00000391080 106 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RNF41Q9H4P4 MIR300-201ENST00000401138 83 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 RPL37P10-201ENST00000412884 288 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 AC107399.1-201ENST00000451226 265 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.62□□□□□ -2.15
RNF41Q9H4P4 AC067942.3-201ENST00000512025 362 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 RNA5SP384-201ENST00000516615 116 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.62□□□□□ -2.15
RNF41Q9H4P4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 AC009229.3-201ENST00000608056 282 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 AL355073.2-201ENST00000612106 557 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 AC130454.1-201ENST00000622948 401 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
RNF41Q9H4P4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
RNF41Q9H4P4 MTND4P12-201ENST00000498999 1377 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 RNU6-245P-201ENST00000384020 107 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 RNU6-601P-201ENST00000384540 107 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 AL356432.1-201ENST00000405809 419 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 AC244636.1-201ENST00000421152 228 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RNF41Q9H4P4 MTCO3P29-201ENST00000432119 779 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 MTND3P10-201ENST00000450967 341 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.61□□□□□ -2.15
RNF41Q9H4P4 RNU6-344P-201ENST00000516635 111 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 AL590705.4-201ENST00000532209 134 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 AK6P2-201ENST00000549020 471 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 AC022254.1-201ENST00000567857 235 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.61□□□□□ -2.15
RNF41Q9H4P4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 TPTEP1-208ENST00000636884 213 ntBASIC1.61□□□□□ -2.15
RNF41Q9H4P4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.6□□□□□ -2.15
RNF41Q9H4P4 RNU6-203P-201ENST00000384038 104 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 RNU6-975P-201ENST00000384296 105 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 RNU6-331P-201ENST00000384724 107 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms