Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 LINC01399-202ENST00000458450 244 ntBASIC0.35□□□□□ -2.35
CHMP4BQ9H444 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.35□□□□□ -2.35
CHMP4BQ9H444 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.35□□□□□ -2.35
CHMP4BQ9H444 RNU1-117P-201ENST00000517041 158 ntBASIC0.35□□□□□ -2.35
CHMP4BQ9H444 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.35□□□□□ -2.35
CHMP4BQ9H444 SNRPGP20-201ENST00000604477 205 ntBASIC0.35□□□□□ -2.35
CHMP4BQ9H444 SNORA28-201ENST00000606769 126 ntBASIC0.35□□□□□ -2.35
CHMP4BQ9H444 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.35□□□□□ -2.35
CHMP4BQ9H444 AL391903.3-201ENST00000612158 163 ntBASIC0.35□□□□□ -2.35
CHMP4BQ9H444 MIR7844-201ENST00000616161 122 ntBASIC0.35□□□□□ -2.35
CHMP4BQ9H444 uc_338.11-201ENST00000619132 160 ntBASIC0.35□□□□□ -2.35
CHMP4BQ9H444 RNU6-227P-201ENST00000362865 103 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 SNORD113-6-201ENST00000363345 75 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 RNU6-424P-201ENST00000384367 105 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 AC106883.1-201ENST00000418805 562 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 snoU13.25-201ENST00000458945 104 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 U7.7-201ENST00000459276 60 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 RNU7-99P-201ENST00000516271 62 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 RNA5SP454-201ENST00000517231 127 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 AP003072.2-201ENST00000527756 676 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.34□□□□□ -2.36
CHMP4BQ9H444 BNIP3P39-201ENST00000601077 554 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 AC004832.4-201ENST00000608952 331 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 AP000240.1-201ENST00000609910 452 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 U6.73-201ENST00000619194 103 ntBASIC0.34□□□□□ -2.36
CHMP4BQ9H444 Y_RNA.330-201ENST00000365230 109 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 SNORD73A-201ENST00000386062 65 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 RNU6-1106P-201ENST00000390845 107 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 U8.16-201ENST00000391279 133 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 RNU6-195P-201ENST00000411352 109 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 AC104332.1-201ENST00000440471 797 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 RNU7-94P-201ENST00000459576 63 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 RPS29P27-201ENST00000463711 170 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 AC007215.1-201ENST00000464893 276 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 AC234772.3-201ENST00000602277 528 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 AC025449.1-201ENST00000603896 529 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 AC139792.3-201ENST00000623525 224 ntBASIC0.33□□□□□ -2.36
CHMP4BQ9H444 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CHMP4BQ9H444 Y_RNA.226-201ENST00000364337 114 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 RNU6-108P-201ENST00000365558 107 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.32□□□□□ -2.36
CHMP4BQ9H444 MIR1287-201ENST00000408492 90 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.32□□□□□ -2.36
CHMP4BQ9H444 MTCO2P7-201ENST00000446518 666 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.32□□□□□ -2.36
CHMP4BQ9H444 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.32□□□□□ -2.36
CHMP4BQ9H444 UBE2V1P12-201ENST00000503954 474 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 SNORD111.1-201ENST00000516421 86 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 Z84480.1-201ENST00000605131 311 ntBASIC0.32□□□□□ -2.36
CHMP4BQ9H444 RNU6-1097P-201ENST00000363586 107 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 RNU6-1286P-201ENST00000383871 107 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 RNU6-42P-201ENST00000384165 107 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 MIR513B-201ENST00000385136 84 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 MTND3P9-201ENST00000429526 346 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 DAP3P1-201ENST00000441522 278 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 MTND2P32-201ENST00000521584 1038 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.31□□□□□ -2.36
CHMP4BQ9H444 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.31□□□□□ -2.36
CHMP4BQ9H444 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.31□□□□□ -2.36
CHMP4BQ9H444 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.31□□□□□ -2.36
CHMP4BQ9H444 MTND1P15-201ENST00000579262 949 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 MIR3941-201ENST00000582572 103 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 MIR5093-201ENST00000583199 100 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 AC131055.1-201ENST00000584626 316 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 TUSC7.1-201ENST00000610969 165 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 RMST_3.1-201ENST00000611651 109 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 SCARNA4-201ENST00000629045 128 ntBASIC0.31□□□□□ -2.36
CHMP4BQ9H444 Y_RNA.354-201ENST00000365448 111 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 Y_RNA.399-201ENST00000383955 105 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 RNY1P14-201ENST00000384426 108 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 RNU1-119P-201ENST00000391122 165 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 RNU1-139P-201ENST00000391307 165 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.3□□□□□ -2.36
CHMP4BQ9H444 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.3□□□□□ -2.36
CHMP4BQ9H444 RPL23AP50-201ENST00000434149 455 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 AL162725.1-201ENST00000435405 301 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.3□□□□□ -2.36
CHMP4BQ9H444 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.3□□□□□ -2.36
CHMP4BQ9H444 RNU7-167P-201ENST00000459160 62 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 AC105417.1-201ENST00000514691 285 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 AC022868.1-201ENST00000517767 391 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 MRPS36P4-201ENST00000534436 298 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 ELOCP32-201ENST00000548625 324 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 AC093913.1-201ENST00000614178 329 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 MIR6734-201ENST00000621166 68 ntBASIC0.3□□□□□ -2.36
CHMP4BQ9H444 Y_RNA.116-201ENST00000363292 103 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 MIR320B2-201ENST00000408479 138 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 RNA5SP504-201ENST00000410676 117 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 AC244098.3-201ENST00000424803 96 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.29□□□□□ -2.36
CHMP4BQ9H444 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 RNU7-12P-201ENST00000516030 62 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 RNU6-344P-201ENST00000516635 111 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.29□□□□□ -2.36
CHMP4BQ9H444 AC109810.1-201ENST00000534066 224 ntBASIC0.29□□□□□ -2.36
CHMP4BQ9H444 AC011195.1-201ENST00000578177 177 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms