Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 MIR549A-201ENST00000385268 96 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 AL033519.2-201ENST00000403958 392 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 RPS12P2-201ENST00000439728 269 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 AC073910.1-201ENST00000445047 438 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 AC093259.1-201ENST00000509755 300 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 MIR449C-201ENST00000516047 92 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 RNU6-965P-201ENST00000516721 96 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 RNA5SP490-201ENST00000517141 136 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 AC026271.5-201ENST00000577873 130 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 MIR4753-201ENST00000585119 83 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 AC067747.1-201ENST00000608026 250 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 U6.92-201ENST00000636464 89 ntBASIC2.89□□□□□ -1.95
CCDC8Q9H0W5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 ZNF72P-201ENST00000425869 1908 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 RNU6-1310P-201ENST00000384153 107 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 MIR1261-201ENST00000408659 82 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 RNU6-1045P-201ENST00000516321 107 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 RNA5SP24-201ENST00000516478 95 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 RNA5SP281-201ENST00000516504 135 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 AC113195.1-201ENST00000579952 141 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 AC240442.1-201ENST00000616055 283 ntBASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC8Q9H0W5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.458-201ENST00000384240 102 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 RN7SKP192-201ENST00000411291 327 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AC123900.1-201ENST00000420390 96 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AL445305.1-201ENST00000432577 575 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 RPS15AP28-201ENST00000435088 386 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 UQCRBP2-201ENST00000447827 297 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 UBL5P3-201ENST00000475112 231 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AC010469.2-201ENST00000496412 480 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AC067942.3-201ENST00000512025 362 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 SNORA40.9-201ENST00000515895 93 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.720-201ENST00000517166 92 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 MIR3684-201ENST00000579779 74 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 MIR4659A-201ENST00000580269 81 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AC064859.1-201ENST00000624741 174 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 AL078596.1-201ENST00000624856 447 ntBASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC8Q9H0W5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 SNORA25.6-201ENST00000364121 118 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 RNU6-1264P-201ENST00000383891 107 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.439-201ENST00000384119 94 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.462-201ENST00000384268 102 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.498-201ENST00000384460 102 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 SNORA40.19-201ENST00000390846 128 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 TOMM22P2-201ENST00000430735 237 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 AC018634.1-201ENST00000437554 401 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 MTND5P22-201ENST00000458380 195 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 YWHAEP4-201ENST00000505390 198 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 ATP5EP1-201ENST00000510257 156 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 RNU6-1143P-201ENST00000516125 104 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 RNU6-948P-201ENST00000516374 107 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 AC087441.2-201ENST00000529141 262 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 AP006437.1-201ENST00000641440 3685 ntBASIC2.86□□□□□ -1.95
CCDC8Q9H0W5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.230-201ENST00000364348 109 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 DEFA7P-201ENST00000382676 285 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 RNU6-708P-201ENST00000384217 107 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.527-201ENST00000384573 102 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 RNA5SP504-201ENST00000410676 117 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 AL390729.2-201ENST00000416137 156 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 RPEP5-201ENST00000441137 268 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 HMGN2P9-201ENST00000476875 229 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 RNU6-327P-201ENST00000516270 127 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 RNA5SP137-201ENST00000516833 135 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 RNU6-1137P-201ENST00000517073 99 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 AC018448.1-201ENST00000552843 316 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 SNORD53-201ENST00000579969 78 ntBASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC8Q9H0W5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC8Q9H0W5 RNU6-545P-201ENST00000362681 104 ntBASIC2.84□□□□□ -1.95
CCDC8Q9H0W5 Y_RNA.183-201ENST00000363882 113 ntBASIC2.84□□□□□ -1.95
CCDC8Q9H0W5 RNU6-975P-201ENST00000384296 105 ntBASIC2.84□□□□□ -1.95
CCDC8Q9H0W5 RNU4-53P-201ENST00000410828 140 ntBASIC2.84□□□□□ -1.95
CCDC8Q9H0W5 RPL19P1-201ENST00000411635 428 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms