Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 HULC.1-201ENST00000612720 240 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 AC079248.2-201ENST00000623779 326 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 SNORD87-201ENST00000364849 89 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.43□□□□□ -2.34
NKX6-2Q9C056 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AL035398.1-201ENST00000430869 322 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AL445305.1-201ENST00000432577 575 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 MTND4P32-201ENST00000437189 1237 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AC093850.1-201ENST00000454121 251 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AL356010.1-201ENST00000456364 102 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.43□□□□□ -2.34
NKX6-2Q9C056 SNORA14.1-201ENST00000516113 141 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 MTND1P35-201ENST00000526739 508 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AP002001.1-203ENST00000534002 267 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AC009094.1-201ENST00000564443 426 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 FRG2DP-202ENST00000566967 323 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 FGF7P1-201ENST00000582820 288 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AL357312.1-201ENST00000603879 298 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 U6.73-201ENST00000619194 103 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AC007494.3-201ENST00000624660 743 ntBASIC0.43□□□□□ -2.34
NKX6-2Q9C056 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
NKX6-2Q9C056 AL390237.1-201ENST00000404226 1415 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 FGF7P2-201ENST00000332473 296 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AC104332.1-201ENST00000440471 797 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 SNRPGP9-201ENST00000456025 225 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 RNU7-63P-201ENST00000459054 62 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 RNU7-90P-201ENST00000459216 62 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AL049830.1-201ENST00000468034 425 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.42□□□□□ -2.34
NKX6-2Q9C056 RNU7-99P-201ENST00000516271 62 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 SNORD111.1-201ENST00000516421 86 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 MTND1P5-201ENST00000517906 940 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 MTND4P7-201ENST00000523876 130 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 SCOCP1-201ENST00000554676 349 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 AL162424.1-201ENST00000602325 221 ntBASIC0.42□□□□□ -2.34
NKX6-2Q9C056 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RNU6-1266P-201ENST00000362794 105 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RNU4-21P-201ENST00000362802 126 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RNU6-424P-201ENST00000384367 105 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 MIR521-1-201ENST00000384902 87 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 U8.16-201ENST00000391279 133 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 AL606923.1-201ENST00000406616 190 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 MTATP6P18-201ENST00000417994 673 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.41□□□□□ -2.34
NKX6-2Q9C056 MTCO2P11-201ENST00000431069 680 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RN7SL429P-201ENST00000479090 223 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RN7SL489P-201ENST00000486185 223 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RN7SL327P-201ENST00000488659 223 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RNA5SP121-201ENST00000516537 101 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 AC027419.1-201ENST00000522976 328 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 AC234772.3-201ENST00000602277 528 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 SNORA28-201ENST00000606769 126 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RN7SL853P-201ENST00000617250 223 ntBASIC0.41□□□□□ -2.34
NKX6-2Q9C056 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
NKX6-2Q9C056 RNU6-392P-201ENST00000364926 101 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 RNU6-996P-201ENST00000365438 107 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 RNU6-1329P-201ENST00000365664 107 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.4□□□□□ -2.35
NKX6-2Q9C056 RNY3P10-201ENST00000384764 102 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.4□□□□□ -2.35
NKX6-2Q9C056 RNU6-325P-201ENST00000411132 105 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC244505.5-201ENST00000443639 207 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC073415.1-201ENST00000449240 153 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC245047.8-201ENST00000456455 284 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 RNU7-94P-201ENST00000459576 63 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC015712.3-201ENST00000559380 164 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC133485.1-201ENST00000567176 124 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC138907.6-201ENST00000568401 126 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 MIR4438-201ENST00000585271 93 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC004223.2-201ENST00000590309 544 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AL357078.3-201ENST00000607528 618 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC009229.3-201ENST00000608056 282 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC027449.1-201ENST00000608890 407 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AL096861.1-201ENST00000610899 123 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 AC122133.1-201ENST00000613964 233 ntBASIC0.4□□□□□ -2.35
NKX6-2Q9C056 RNU6-1120P-201ENST00000362988 108 ntBASIC0.39□□□□□ -2.35
NKX6-2Q9C056 Y_RNA.140-201ENST00000363474 103 ntBASIC0.39□□□□□ -2.35
NKX6-2Q9C056 RNU6-727P-201ENST00000363592 107 ntBASIC0.39□□□□□ -2.35
NKX6-2Q9C056 Y_RNA.159-201ENST00000363674 87 ntBASIC0.39□□□□□ -2.35
NKX6-2Q9C056 Y_RNA.265-201ENST00000364677 108 ntBASIC0.39□□□□□ -2.35
NKX6-2Q9C056 SNORA2.2-201ENST00000365473 135 ntBASIC0.39□□□□□ -2.35
NKX6-2Q9C056 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
NKX6-2Q9C056 RNU6-110P-201ENST00000384508 104 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms