Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNU4-73P-201ENST00000363164 141 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 RNU6-827P-201ENST00000365553 106 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 Y_RNA.476-201ENST00000384347 108 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 MRPL42P2-201ENST00000403169 426 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 RNU6-57P-201ENST00000411348 103 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 Z95118.1-201ENST00000421372 247 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 AC022364.2-201ENST00000457963 554 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 snoU13.6-201ENST00000458785 104 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 AC022493.2-201ENST00000506122 481 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.21□□□□□ -2.38
TRIM4Q9C037 AL139418.1-201ENST00000613613 177 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 AC104010.1-201ENST00000616889 150 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 RNU6-550P-201ENST00000391057 101 ntBASIC0.2□□□□□ -2.38
TRIM4Q9C037 MTND3P17-201ENST00000416968 344 ntBASIC0.2□□□□□ -2.38
TRIM4Q9C037 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.2□□□□□ -2.38
TRIM4Q9C037 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.2□□□□□ -2.38
TRIM4Q9C037 TCL6_2.1-201ENST00000615162 119 ntBASIC0.2□□□□□ -2.38
TRIM4Q9C037 AL078595.3-201ENST00000623815 1166 ntBASIC0.2□□□□□ -2.38
TRIM4Q9C037 AC013437.2-201ENST00000639587 677 ntBASIC0.2□□□□□ -2.38
TRIM4Q9C037 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.2□□□□□ -2.38
TRIM4Q9C037 MTND5P16-201ENST00000460269 1703 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 RNU6-660P-201ENST00000364566 109 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 SNORA2.2-201ENST00000365473 135 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AC244098.3-201ENST00000424803 96 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.19□□□□□ -2.38
TRIM4Q9C037 EXOSC3P1-201ENST00000448649 500 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.19□□□□□ -2.38
TRIM4Q9C037 snoU13.25-201ENST00000458945 104 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 RNU7-57P-201ENST00000459540 60 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
TRIM4Q9C037 RNU6-1220P-201ENST00000517126 108 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AC022616.3-201ENST00000523940 148 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AP003168.1-201ENST00000530091 307 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.19□□□□□ -2.38
TRIM4Q9C037 AC004584.2-201ENST00000570407 410 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AL162424.1-201ENST00000602325 221 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AL096861.1-201ENST00000610899 123 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 AL391903.3-201ENST00000612158 163 ntBASIC0.19□□□□□ -2.38
TRIM4Q9C037 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.19□□□□□ -2.38
TRIM4Q9C037 MIR409-201ENST00000362237 79 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 MIRLET7D-201ENST00000362263 87 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 RNU6-1305P-201ENST00000364353 104 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 RNU6-163P-201ENST00000384396 106 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 RNU6-1242P-201ENST00000391052 103 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 RNU6-1000P-201ENST00000391066 106 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.18□□□□□ -2.38
TRIM4Q9C037 AC004866.1-201ENST00000411748 78 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 MTCO2P21-201ENST00000419780 677 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 AC074290.1-201ENST00000448883 135 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 USP9YP25-201ENST00000457708 443 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.18□□□□□ -2.38
TRIM4Q9C037 AC026470.2-201ENST00000561492 181 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 MIR4493-201ENST00000584016 73 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 AL359999.1-201ENST00000604513 294 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
TRIM4Q9C037 AC240442.1-201ENST00000616055 283 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 AL607023.1-201ENST00000620045 248 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 AC100810.6-201ENST00000638068 285 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.18□□□□□ -2.38
TRIM4Q9C037 Y_RNA.48-201ENST00000362710 103 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 RNU6-923P-201ENST00000364753 107 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 SNORA36.2-201ENST00000384004 127 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 SNORA8.3-201ENST00000384679 139 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 Y_RNA.608-201ENST00000410647 95 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 RPS3AP3-201ENST00000411933 242 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 RPL23AP50-201ENST00000434149 455 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC009237.7-201ENST00000447357 229 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 MTCO2P6-201ENST00000463134 685 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.17□□□□□ -2.38
TRIM4Q9C037 SCARNA24.1-201ENST00000516465 137 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 RNU7-128P-201ENST00000517247 62 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC025647.1-201ENST00000517879 253 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC106038.2-201ENST00000520706 568 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC023827.1-201ENST00000569247 97 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC011195.1-201ENST00000578177 177 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC131055.1-201ENST00000584626 316 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC004832.4-201ENST00000608952 331 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AC138649.3-201ENST00000622154 254 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 AL138960.2-201ENST00000625145 535 ntBASIC0.17□□□□□ -2.38
TRIM4Q9C037 Y_RNA.18-201ENST00000362461 102 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 SNORD114-31-201ENST00000363219 75 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 Y_RNA.330-201ENST00000365230 109 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRIM4Q9C037 RNU6-157P-201ENST00000383957 107 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 RNY1P8-201ENST00000383970 114 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 MIR586-201ENST00000385035 97 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 RNU6-1186P-201ENST00000410429 97 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 RNA5SP222-201ENST00000411039 105 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.16□□□□□ -2.38
TRIM4Q9C037 MTCO2P23-201ENST00000425216 680 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 AL162725.1-201ENST00000435405 301 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 STAG3L5P-204ENST00000443759 179 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.16□□□□□ -2.38
TRIM4Q9C037 LINC01399-202ENST00000458450 244 ntBASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.16□□□□□ -2.38
TRIM4Q9C037 AC092354.1-201ENST00000606057 376 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms