Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC244505.4-201ENST00000434905 287 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 SSXP5-201ENST00000443473 287 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC140059.1-201ENST00000489238 361 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC074198.2-201ENST00000508153 258 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 RNU6-191P-201ENST00000516295 94 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 RNY3P16-201ENST00000516338 101 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.87□□□□□ -1.95
NDC1Q9BTX1 MIR5006-201ENST00000583027 110 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 DEFB117-201ENST00000602356 141 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC099778.2-201ENST00000610904 211 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC090517.3-201ENST00000625170 141 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NDC1Q9BTX1 MIR7515-201ENST00000637837 67 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC093831.2-201ENST00000624393 3427 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 SNORA5B-201ENST00000363786 132 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NDC1Q9BTX1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 MICF-203ENST00000432679 129 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.86□□□□□ -1.95
NDC1Q9BTX1 RNU6-344P-201ENST00000516635 111 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 RNU2-44P-201ENST00000516795 194 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 RNU6-255P-201ENST00000516957 105 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.86□□□□□ -1.95
NDC1Q9BTX1 AC010620.2-201ENST00000600135 313 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 AC072026.1-201ENST00000605023 201 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 SNORD11B-201ENST00000607707 90 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 AC008264.2-201ENST00000610193 3731 ntBASIC2.86□□□□□ -1.95
NDC1Q9BTX1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NDC1Q9BTX1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NDC1Q9BTX1 AC010329.5-201ENST00000623497 2174 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NDC1Q9BTX1 RNU6-454P-201ENST00000364292 107 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 RNU6-923P-201ENST00000364753 107 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 SNORA51.4-201ENST00000364993 124 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 SNORA12-201ENST00000391162 147 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 MIR1289-1-201ENST00000408836 144 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 RNA5SP504-201ENST00000410676 117 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 BMS1P22-201ENST00000414726 313 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.85□□□□□ -1.95
NDC1Q9BTX1 AC009969.1-201ENST00000438726 172 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 RPS12P18-201ENST00000442381 270 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.85□□□□□ -1.95
NDC1Q9BTX1 AC083906.5-201ENST00000503722 328 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 RNU1-117P-201ENST00000517041 158 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 RNU2-12P-201ENST00000517216 168 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.85□□□□□ -1.95
NDC1Q9BTX1 RPL17P51-201ENST00000605218 238 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 snoU18.1-201ENST00000629629 71 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 MIR7157-201ENST00000635801 60 ntBASIC2.85□□□□□ -1.95
NDC1Q9BTX1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
NDC1Q9BTX1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NDC1Q9BTX1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.84□□□□□ -1.95
NDC1Q9BTX1 Y_RNA.329-201ENST00000365209 107 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 RNU6-746P-201ENST00000384112 109 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 RNU6-851P-201ENST00000384565 107 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 RNU6-918P-201ENST00000391219 106 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 RN7SKP51-201ENST00000410781 304 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.84□□□□□ -1.95
NDC1Q9BTX1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC024067.1-201ENST00000426199 223 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.84□□□□□ -1.95
NDC1Q9BTX1 RNU6-1212P-201ENST00000517023 104 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC006380.1-201ENST00000603598 186 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 AC068205.3-201ENST00000636385 468 ntBASIC2.84□□□□□ -1.95
NDC1Q9BTX1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NDC1Q9BTX1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.84□□□□□ -1.96
NDC1Q9BTX1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.84□□□□□ -1.96
NDC1Q9BTX1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NDC1Q9BTX1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NDC1Q9BTX1 AC110774.1-201ENST00000623567 2018 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.83□□□□□ -1.96
NDC1Q9BTX1 SNORA68.1-201ENST00000364537 132 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.308-201ENST00000365043 101 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 RNU6-211P-201ENST00000384047 107 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.83□□□□□ -1.96
NDC1Q9BTX1 RPL30P4-201ENST00000429309 333 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 RPS29P26-201ENST00000477483 171 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 RN7SL20P-201ENST00000488827 297 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.83□□□□□ -1.96
NDC1Q9BTX1 RNU6-436P-201ENST00000516171 114 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 RN7SKP43-201ENST00000516173 320 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 RNU6-406P-201ENST00000516470 107 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 SCARNA3-201ENST00000517097 143 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 AL033523.1-201ENST00000605153 153 ntBASIC2.83□□□□□ -1.96
NDC1Q9BTX1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NDC1Q9BTX1 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 AC073325.2-201ENST00000339545 159 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 RNU6-324P-201ENST00000363957 106 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.233-201ENST00000364407 101 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 SNORD32B-201ENST00000364460 84 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms