Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS25Q9BRG1 RNA5SP94-201ENST00000516917 108 ntBASIC-0.3□□□□□ -2.46
VPS25Q9BRG1 RNU1-117P-201ENST00000517041 158 ntBASIC-0.3□□□□□ -2.46
VPS25Q9BRG1 MTATP6P15-201ENST00000527233 835 ntBASIC-0.3□□□□□ -2.46
VPS25Q9BRG1 AC013244.3-201ENST00000605614 388 ntBASIC-0.3□□□□□ -2.46
VPS25Q9BRG1 AC068792.1-201ENST00000621354 417 ntBASIC-0.3□□□□□ -2.46
VPS25Q9BRG1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 RNU6-809P-201ENST00000384461 107 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 SNORD116-12-201ENST00000384468 92 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 RNU6-700P-201ENST00000391043 107 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 RNA5SP496-201ENST00000391240 109 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 SNORA75.6-201ENST00000391318 127 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AC007327.1-201ENST00000447461 264 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 RNU6-323P-201ENST00000521915 107 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AC023442.1-201ENST00000531247 422 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AC104695.3-201ENST00000604052 296 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AP000907.4-201ENST00000604143 237 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AL121895.2-201ENST00000619558 447 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 AL078596.1-201ENST00000624856 447 ntBASIC-0.31□□□□□ -2.46
VPS25Q9BRG1 RNU6-715P-201ENST00000365204 103 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 RNU6-514P-201ENST00000384208 107 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 MIR593-201ENST00000384856 100 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 MIR558-201ENST00000384920 94 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 MIR643-201ENST00000385267 97 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 PCNPP3-201ENST00000393579 471 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 ERHP2-201ENST00000402323 299 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 MIR1302-7-201ENST00000408841 72 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 AC074290.1-201ENST00000448883 135 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 RPL39P5-202ENST00000512505 151 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 AC116347.2-201ENST00000514912 523 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 RNU6-58P-201ENST00000517143 103 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 AC023157.2-201ENST00000540596 141 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 MIR4298-201ENST00000584380 73 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 AC012433.1-201ENST00000588916 398 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 RBM11P1-201ENST00000604951 799 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 AL121992.2-201ENST00000606262 256 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 AC098679.4-201ENST00000624241 654 ntBASIC-0.32□□□□□ -2.46
VPS25Q9BRG1 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 SNORA8.2-201ENST00000384372 139 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 MIR145-201ENST00000384967 88 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AP003181.2-201ENST00000528941 181 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AC104383.1-201ENST00000530297 370 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AC026470.2-201ENST00000561492 181 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 MTATP6P25-201ENST00000574491 261 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 MIR5190-201ENST00000581537 80 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AC104984.5-201ENST00000586878 94 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 MIR6734-201ENST00000621166 68 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 AL445984.1-201ENST00000637834 659 ntBASIC-0.33□□□□□ -2.46
VPS25Q9BRG1 SNORA1B-201ENST00000362535 133 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 SNORA25.9-201ENST00000365087 128 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RNU6V-201ENST00000384105 107 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 MIR487A-201ENST00000385009 80 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RNU1-139P-201ENST00000391307 165 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 MTATP6P16-201ENST00000434543 526 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RPL37P21-201ENST00000435890 276 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RPS24P1-201ENST00000438550 371 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RPL22P17-201ENST00000438729 315 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RNU7-94P-201ENST00000459576 63 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AC010587.1-201ENST00000505809 469 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RNU2-56P-201ENST00000516826 190 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AC141557.1-201ENST00000540982 400 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 AL359697.1-201ENST00000624879 587 ntBASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
VPS25Q9BRG1 RNY4P24-201ENST00000362735 96 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 RNA5SP325-201ENST00000363756 130 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 MIR520C-201ENST00000385005 87 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 MIR23A-201ENST00000385245 73 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 HSFY5P-201ENST00000453726 309 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 MTCO2P6-201ENST00000463134 685 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 AP001372.4-201ENST00000524889 472 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 AC007742.2-201ENST00000618226 398 ntBASIC-0.35□□□□□ -2.47
VPS25Q9BRG1 AC008873.1-201ENST00000625051 138 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms