Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 MIR561-201ENST00000385216 97 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 MIR153-2-201ENST00000385225 87 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 MIR518E-201ENST00000385252 88 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 MIR549A-201ENST00000385268 96 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 SNORA40.18-201ENST00000391200 128 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 RNU2-48P-201ENST00000410694 191 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 RNU2-32P-201ENST00000411193 191 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 PMCHL1-202ENST00000423102 261 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC099799.1-201ENST00000439809 192 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 RNU7-87P-201ENST00000459343 62 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC007215.1-201ENST00000464893 276 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC018868.1-201ENST00000491307 315 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC016727.2-201ENST00000603988 621 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC006157.1-201ENST00000611750 366 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 MIR6895-201ENST00000613497 78 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC087588.2-201ENST00000617667 426 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 AC091925.1-201ENST00000623204 462 ntBASIC2.11□□□□□ -2.07
RTP3Q9BQQ7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 SNORA25.9-201ENST00000365087 128 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 RNU6-546P-201ENST00000383991 107 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.466-201ENST00000384294 113 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 MIR625-201ENST00000385047 85 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 MIR1294-201ENST00000408503 142 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AC096644.2-201ENST00000429278 159 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 RNU7-169P-201ENST00000459456 61 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AL163540.1-201ENST00000485382 386 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 RPL36AP21-201ENST00000490372 323 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 MIR449C-201ENST00000516047 92 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 RNU6-965P-201ENST00000516721 96 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AC027288.2-201ENST00000553028 243 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AC092447.9-201ENST00000603395 144 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AL353621.2-201ENST00000605340 133 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 MIR8070-201ENST00000616510 88 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AC007485.1-201ENST00000616755 206 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 AC012640.5-201ENST00000623897 319 ntBASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RTP3Q9BQQ7 MTND5P16-201ENST00000460269 1703 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.28-201ENST00000362554 111 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 SNORD115-8-201ENST00000363856 82 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 SNORD115-38-201ENST00000365037 82 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.358-201ENST00000365491 99 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 SNORA25B-201ENST00000365507 128 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 SNORA22B-201ENST00000383876 138 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 RNY1P14-201ENST00000384426 108 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 RNU6-541P-201ENST00000384709 110 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 SNORA17.3-201ENST00000391159 129 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 RNU7-4P-201ENST00000516961 62 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 RNU6-58P-201ENST00000517143 103 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 RN7SKP295-201ENST00000517264 153 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 AC022616.8-201ENST00000533569 253 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 AC110588.1-201ENST00000559699 137 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 AC090517.1-201ENST00000569307 266 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 AL132822.1-201ENST00000617063 513 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 MIR1248-201ENST00000629190 106 ntBASIC2.09□□□□□ -2.07
RTP3Q9BQQ7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
RTP3Q9BQQ7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 RNU6-222P-201ENST00000362438 107 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.364-201ENST00000365532 101 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 RNU6-26P-201ENST00000383985 107 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 SNORA69.1-201ENST00000390904 137 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 MCFD2P1-201ENST00000417812 300 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 AL445685.2-201ENST00000422551 342 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 AL445305.1-201ENST00000432577 575 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 AL160004.2-201ENST00000432935 350 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 MTND4P19-201ENST00000446659 478 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 CHEK2P4-201ENST00000450340 246 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 U8.22-201ENST00000459141 133 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms