Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.67□□□□□ -1.98
TIMP4Q99727 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
TIMP4Q99727 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 AC025750.2-201ENST00000442609 450 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 RPS29P26-201ENST00000477483 171 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 RPL23AP70-201ENST00000483361 460 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 RPL36AP48-201ENST00000485521 314 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.67□□□□□ -1.98
TIMP4Q99727 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.67□□□□□ -1.98
TIMP4Q99727 SCGB1D5P-201ENST00000515134 247 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 SNORA31.26-201ENST00000517250 137 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.67□□□□□ -1.98
TIMP4Q99727 MIR5006-201ENST00000583027 110 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 MIR4506-201ENST00000584693 77 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 AC072026.1-201ENST00000605023 201 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 MIR7106-201ENST00000612419 65 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 AC073349.3-201ENST00000617616 186 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 snoU18.1-201ENST00000629629 71 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.67□□□□□ -1.98
TIMP4Q99727 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TIMP4Q99727 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TIMP4Q99727 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.67□□□□□ -1.98
TIMP4Q99727 U3.9-201ENST00000363823 204 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 Y_RNA.329-201ENST00000365209 107 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 SNORA18.2-201ENST00000383865 132 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 RNU6-1027P-201ENST00000383998 107 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 SNORA19-201ENST00000384737 128 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 RNA5SP201-201ENST00000410316 124 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 AC004866.1-201ENST00000411748 78 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 AC009963.1-201ENST00000417265 157 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.66□□□□□ -1.98
TIMP4Q99727 RNA5SP385-201ENST00000515947 110 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 Y_RNA.662-201ENST00000516028 97 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 RNU6-1278P-201ENST00000516130 107 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 RNU6-406P-201ENST00000516470 107 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 SNORA31.21-201ENST00000517180 77 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.66□□□□□ -1.98
TIMP4Q99727 AC107016.2-201ENST00000547968 190 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 EIF4A1P12-201ENST00000551910 141 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TIMP4Q99727 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.66□□□□□ -1.98
TIMP4Q99727 AL391813.1-201ENST00000603098 260 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 AC006380.1-201ENST00000603598 186 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 AC005562.2-201ENST00000618264 111 ntBASIC2.66□□□□□ -1.98
TIMP4Q99727 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TIMP4Q99727 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.66□□□□□ -1.98
TIMP4Q99727 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TIMP4Q99727 RNU6-655P-201ENST00000362858 107 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 Y_RNA.217-201ENST00000364214 105 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 Y_RNA.233-201ENST00000364407 101 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 RNU6-211P-201ENST00000384047 107 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 SNORA12-201ENST00000391162 147 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 RNU6-918P-201ENST00000391219 106 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 RNU2-54P-201ENST00000410299 190 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 Z98742.2-201ENST00000431564 187 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.65□□□□□ -1.99
TIMP4Q99727 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.65□□□□□ -1.99
TIMP4Q99727 SNORD2.1-201ENST00000458762 69 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 snoU13.14-201ENST00000459372 104 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 Y_RNA.641-201ENST00000459414 105 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 RPL31P41-201ENST00000477967 372 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 RNU6-56P-201ENST00000516986 93 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 AC027176.1-201ENST00000560204 514 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.65□□□□□ -1.99
TIMP4Q99727 AL365265.1-201ENST00000621045 234 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 MIR6733-201ENST00000635723 61 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 AC021753.1-201ENST00000635724 168 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.65□□□□□ -1.99
TIMP4Q99727 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.65□□□□□ -1.99
TIMP4Q99727 AC010680.1-201ENST00000590024 3590 ntBASIC2.65□□□□□ -1.99
TIMP4Q99727 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
TIMP4Q99727 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.64□□□□□ -1.99
TIMP4Q99727 Y_RNA.8-201ENST00000362353 102 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 RNU6-1210P-201ENST00000363775 107 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 RNU1-57P-201ENST00000384491 166 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 Y_RNA.506-201ENST00000384494 102 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 RNU6-125P-201ENST00000384505 107 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 RNA5SP344-201ENST00000411081 104 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 BMS1P22-201ENST00000414726 313 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 BTF3P11-201ENST00000426582 477 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.64□□□□□ -1.99
TIMP4Q99727 AL392103.1-201ENST00000447000 198 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 RPS29P12-201ENST00000460178 152 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 RNA5SP367-201ENST00000516557 118 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 RNU2-44P-201ENST00000516795 194 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 DEFB131C-201ENST00000528817 165 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.64□□□□□ -1.99
TIMP4Q99727 SNORD11B-201ENST00000607707 90 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 AC104465.1-201ENST00000611365 139 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 TCL6_2.1-201ENST00000615162 119 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.64□□□□□ -1.99
TIMP4Q99727 SNORA5B-201ENST00000363786 132 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 RNU6-454P-201ENST00000364292 107 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 Y_RNA.510-201ENST00000384511 114 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 MIR767-201ENST00000390228 109 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 U3.40-201ENST00000408706 208 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.63□□□□□ -1.99
TIMP4Q99727 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms