Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-479P-201ENST00000516348 105 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 DEFB131E-201ENST00000532329 154 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 MIR5695-201ENST00000579717 85 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 DEFB131E-202ENST00000602581 683 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 AC104820.1-201ENST00000624183 307 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 U6.99-201ENST00000637524 83 ntBASIC-0.67□□□□□ -2.52
COL12A1Q99715 MIR1-1-201ENST00000362147 71 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 AL121978.1-201ENST00000402778 359 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 RNU6-705P-201ENST00000410601 104 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 AC009237.7-201ENST00000447357 229 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 SUMO1P2-201ENST00000452524 304 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 RNU6-412P-201ENST00000516434 106 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 MIR6851-201ENST00000617060 67 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
COL12A1Q99715 RNA5SP261-201ENST00000410536 106 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 SNORD83.1-201ENST00000411362 77 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.68□□□□□ -2.52
COL12A1Q99715 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.68□□□□□ -2.52
COL12A1Q99715 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.68□□□□□ -2.52
COL12A1Q99715 AC018630.3-201ENST00000542637 96 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 BNIP3P6-201ENST00000549284 499 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 AL391840.1-201ENST00000571144 367 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 BCRP9-201ENST00000605312 388 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 AC093726.3-201ENST00000637588 150 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 ZNF885P-201ENST00000420174 1098 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 MTCO3P1-205ENST00000422088 832 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.68□□□□□ -2.52
COL12A1Q99715 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.68□□□□□ -2.52
COL12A1Q99715 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.68□□□□□ -2.52
COL12A1Q99715 snoU13.27-201ENST00000459278 104 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 RPL21P9-201ENST00000556149 474 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.68□□□□□ -2.52
COL12A1Q99715 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 MIR181B2-201ENST00000385004 89 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 MIR520G-201ENST00000385064 90 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 MIR520H-201ENST00000385126 88 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 RNA5SP323-201ENST00000391094 133 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 MIR889-201ENST00000401280 79 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 RPS23P5-201ENST00000495419 428 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.69□□□□□ -2.52
COL12A1Q99715 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.69□□□□□ -2.52
COL12A1Q99715 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.69□□□□□ -2.52
COL12A1Q99715 AC080078.2-201ENST00000603766 501 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 RNY1P11-201ENST00000363759 113 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 SNORD113.3-201ENST00000364630 78 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 AC022028.1-201ENST00000412054 408 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.69□□□□□ -2.52
COL12A1Q99715 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.69□□□□□ -2.52
COL12A1Q99715 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.69□□□□□ -2.52
COL12A1Q99715 BX322639.1-202ENST00000423987 2213 ntBASIC-0.69□□□□□ -2.52
COL12A1Q99715 SNORD115-27-201ENST00000364430 82 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 RNU6-169P-201ENST00000365336 107 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AL353997.1-201ENST00000432936 108 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AL163973.1-201ENST00000484753 577 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC104383.1-201ENST00000530297 370 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 MIR378D2-201ENST00000580636 98 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC006380.1-201ENST00000603598 186 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 U8.6-201ENST00000364939 135 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 SNORA81-201ENST00000408493 178 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 RNA5SP475-201ENST00000410568 110 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 RNU7-34P-201ENST00000459394 64 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC093259.1-201ENST00000509755 300 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC108019.1-201ENST00000512540 175 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC023827.1-201ENST00000569247 97 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.7□□□□□ -2.52
COL12A1Q99715 AP002371.2-201ENST00000624450 503 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AL451046.2-201ENST00000403074 277 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC010655.3-201ENST00000478818 450 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 AC113420.1-201ENST00000507903 571 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 MTND3P19-201ENST00000603825 345 ntBASIC-0.7□□□□□ -2.52
COL12A1Q99715 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.7□□□□□ -2.52
COL12A1Q99715 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 SNORA72.2-201ENST00000365028 127 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 ELOCP21-201ENST00000412558 336 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.71□□□□□ -2.52
COL12A1Q99715 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.71□□□□□ -2.52
COL12A1Q99715 RPL37P6-201ENST00000460682 294 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.71□□□□□ -2.52
COL12A1Q99715 AP000484.1-201ENST00000620067 1252 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 RNU6-431P-201ENST00000383874 107 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms