Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC010469.2-201ENST00000496412 480 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.1□□□□□ -2.39
LYSMD1Q96S90 RPL39P5-202ENST00000512505 151 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 RNU6-1110P-201ENST00000516462 101 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC025647.1-201ENST00000517879 253 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC069431.2-201ENST00000604149 1099 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 MIR6718-201ENST00000616153 80 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC011155.2-201ENST00000623202 216 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AL078596.1-201ENST00000624856 447 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 snoZ196.1-201ENST00000625269 89 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 MIR103A2-201ENST00000362154 78 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 RNU6-157P-201ENST00000383957 107 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 MIR586-201ENST00000385035 97 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 RNU6-994P-201ENST00000410507 111 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.608-201ENST00000410647 95 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 AL663109.1-201ENST00000411498 844 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.09□□□□□ -2.4
LYSMD1Q96S90 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.09□□□□□ -2.4
LYSMD1Q96S90 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.09□□□□□ -2.4
LYSMD1Q96S90 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.09□□□□□ -2.4
LYSMD1Q96S90 AC105313.1-201ENST00000509121 353 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 RNA5SP454-201ENST00000517231 127 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 RNU7-128P-201ENST00000517247 62 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 AC092354.1-201ENST00000606057 376 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 AC138649.3-201ENST00000622154 254 ntBASIC0.09□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.265-201ENST00000364677 108 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.367-201ENST00000365544 101 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 RNU6-424P-201ENST00000384367 105 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 MIR140-201ENST00000385282 100 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 MTCO2P34-201ENST00000421994 607 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.08□□□□□ -2.4
LYSMD1Q96S90 AC091951.3-201ENST00000504093 246 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.08□□□□□ -2.4
LYSMD1Q96S90 RNU7-12P-201ENST00000516030 62 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 SNORA62.5-201ENST00000516634 120 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 RNU6-323P-201ENST00000521915 107 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 PCMTD1P2-201ENST00000565017 355 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 AC004584.2-201ENST00000570407 410 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 AC005771.1-201ENST00000585581 349 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 RSL24D1P11-201ENST00000591045 491 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 AC004832.4-201ENST00000608952 331 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 AC022418.1-201ENST00000624118 445 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 AC008133.2-201ENST00000624540 351 ntBASIC0.08□□□□□ -2.4
LYSMD1Q96S90 RNA5SP264-201ENST00000363115 107 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 SNORA25.3-201ENST00000363205 127 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 RNU6-266P-201ENST00000364225 107 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 RNU6-793P-201ENST00000384233 104 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.476-201ENST00000384347 108 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 RNA5SP494-201ENST00000410653 129 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 RNA5SP504-201ENST00000410676 117 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.07□□□□□ -2.4
LYSMD1Q96S90 MTCO2P7-201ENST00000446518 666 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.07□□□□□ -2.4
LYSMD1Q96S90 SNORA25.17-201ENST00000517184 124 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 AC022868.1-201ENST00000517767 391 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 MIR3192-201ENST00000584920 77 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 SNORA28-201ENST00000606769 126 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 AL136317.1-201ENST00000612653 226 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 MIR8087-201ENST00000612745 78 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 AC007014.2-201ENST00000615581 479 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.07□□□□□ -2.4
LYSMD1Q96S90 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
LYSMD1Q96S90 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 RNU5F-7P-201ENST00000363696 115 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.480-201ENST00000384364 102 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 RNU6-1297P-201ENST00000384415 104 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 RNU6-393P-201ENST00000384475 107 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 MIR32-201ENST00000384965 70 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 SNORD70.1-201ENST00000391007 85 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AL358176.2-201ENST00000425769 204 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 RPL31P35-201ENST00000431058 377 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AC104850.1-201ENST00000435940 476 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.06□□□□□ -2.4
LYSMD1Q96S90 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.06□□□□□ -2.4
LYSMD1Q96S90 EPS15P1-201ENST00000448836 336 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.06□□□□□ -2.4
LYSMD1Q96S90 RPS29P15-201ENST00000458329 171 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.672-201ENST00000516289 104 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 MTND4LP26-201ENST00000518144 282 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AL117336.2-201ENST00000602435 335 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AL157392.4-201ENST00000609756 345 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.06□□□□□ -2.4
LYSMD1Q96S90 AL133173.2-201ENST00000614270 90 ntBASIC0.06□□□□□ -2.4
LYSMD1Q96S90 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
LYSMD1Q96S90 RNU6-1097P-201ENST00000363586 107 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.258-201ENST00000364613 105 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 RNU6-1200P-201ENST00000384162 107 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.05□□□□□ -2.4
LYSMD1Q96S90 RNU6-221P-201ENST00000459541 99 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 MTND2P31-201ENST00000512602 616 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 AC010493.1-201ENST00000513479 292 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 RNU2-69P-201ENST00000516061 100 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 RNU7-99P-201ENST00000516271 62 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 AP003327.1-201ENST00000529684 127 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms