Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SNORA62.5-201ENST00000516634 120 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 AC022616.3-201ENST00000523940 148 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 MIR4300-201ENST00000581016 96 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 AC068790.2-201ENST00000602601 557 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 AC007742.2-201ENST00000618226 398 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 AP000943.4-201ENST00000622912 357 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 AC011155.2-201ENST00000623202 216 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 AC139792.3-201ENST00000623525 224 ntBASIC-0.13□□□□□ -2.43
AP1S3Q96PC3 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 SNORA42.1-201ENST00000363515 137 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 MIR487A-201ENST00000385009 80 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 MIR1302-7-201ENST00000408841 72 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 RNU6-994P-201ENST00000410507 111 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC073261.1-201ENST00000429409 121 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC119618.1-201ENST00000434191 222 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 RPL37P21-201ENST00000435890 276 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC093019.1-201ENST00000443135 252 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC067940.1-201ENST00000458411 300 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 RNA5SP454-201ENST00000517231 127 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC026470.2-201ENST00000561492 181 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC002044.1-201ENST00000606707 158 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 SNORA28-201ENST00000606769 126 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 MIR6718-201ENST00000616153 80 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 RNU6-489P-201ENST00000618289 107 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC015726.2-201ENST00000620112 122 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 AC004808.1-201ENST00000627671 721 ntBASIC-0.14□□□□□ -2.43
AP1S3Q96PC3 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 RNA5SP95-201ENST00000410319 137 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 MTATP6P20-201ENST00000414147 562 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 ELOCP4-201ENST00000420090 333 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC008134.1-201ENST00000420943 193 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC137499.1-201ENST00000427602 88 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 SNRPGP9-201ENST00000456025 225 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC116562.3-201ENST00000506136 177 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 SNORA25.12-201ENST00000516202 82 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC068587.5-201ENST00000528506 175 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC016957.1-201ENST00000534895 309 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AK6P2-201ENST00000549020 471 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 MIR4290-201ENST00000583807 95 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC009159.2-201ENST00000617603 606 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 MIR6734-201ENST00000621166 68 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC008873.1-201ENST00000625051 138 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC091948.2-201ENST00000636510 279 ntBASIC-0.15□□□□□ -2.43
AP1S3Q96PC3 AC027514.1-201ENST00000588561 1603 ntBASIC-0.16□□□□□ -2.43
AP1S3Q96PC3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 SNORD113.3-201ENST00000364630 78 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 RNU6-679P-201ENST00000391003 106 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 RNU6-387P-201ENST00000411331 105 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 MTND4LP18-201ENST00000526864 291 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 MIR3612-201ENST00000579753 87 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 SNORA25.18-201ENST00000607153 114 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 RMST_2.1-201ENST00000617263 136 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 AL078596.1-201ENST00000624856 447 ntBASIC-0.16□□□□□ -2.44
AP1S3Q96PC3 MIR1-1-201ENST00000362147 71 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 RNU6-660P-201ENST00000364566 109 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 RNU6-533P-201ENST00000384144 107 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AL355143.1-201ENST00000407101 841 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 MTCO2P23-201ENST00000425216 680 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 RPS29P27-201ENST00000463711 170 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AC007215.1-201ENST00000464893 276 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AP001372.4-201ENST00000524889 472 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AC104695.3-201ENST00000604052 296 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AC104408.1-201ENST00000605241 170 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 AL359697.1-201ENST00000624879 587 ntBASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.17□□□□□ -2.44
AP1S3Q96PC3 MIR371B-201ENST00000638082 66 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms