Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 Y_RNA.445-201ENST00000384168 102 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 MIR1261-201ENST00000408659 82 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 UQCRBP2-201ENST00000447827 297 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 RNU6-856P-201ENST00000516959 98 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 AK6P2-201ENST00000549020 471 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 AC121758.2-201ENST00000553271 193 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 AC006600.1-201ENST00000572529 153 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 snoZ196.1-201ENST00000625269 89 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 MIR4272-201ENST00000635924 64 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC138Q96M89 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CCDC138Q96M89 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 AL159152.1-201ENST00000635019 2587 ntBASIC2.45□□□□□ -2.02
CCDC138Q96M89 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC138Q96M89 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC138Q96M89 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CCDC138Q96M89 RNY3P4-201ENST00000384428 101 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 SNORD12B-201ENST00000410433 91 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 AC009963.1-201ENST00000417265 157 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC138Q96M89 CHEK2P4-201ENST00000450340 246 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC138Q96M89 Y_RNA.638-201ENST00000459374 113 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 AC107222.1-201ENST00000510899 637 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 RNU6-107P-201ENST00000516643 102 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC138Q96M89 AC006157.1-201ENST00000611750 366 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC138Q96M89 AL606534.2-204ENST00000635008 178 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC138Q96M89 AC007336.1-201ENST00000576365 3828 ntBASIC2.44□□□□□ -2.02
CCDC138Q96M89 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC138Q96M89 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CCDC138Q96M89 AL136360.1-201ENST00000503377 1900 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 Y_RNA.128-201ENST00000363391 112 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RNA5SP68-201ENST00000363885 119 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RNY1P14-201ENST00000384426 108 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 MIR597-201ENST00000384968 97 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 MIR1185-2-201ENST00000408687 86 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RNA5SP450-201ENST00000411206 102 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RNU6-57P-201ENST00000411348 103 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 MTCO2P12-201ENST00000427426 682 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RNA5SP320-201ENST00000516263 124 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RNA5SP148-201ENST00000516527 94 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 RNU4-77P-201ENST00000516692 156 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC138Q96M89 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC138Q96M89 AC083806.3-201ENST00000614016 455 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 U4.3-201ENST00000621047 82 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC138Q96M89 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC138Q96M89 ZNF658B-202ENST00000615961 3375 ntBASIC2.43□□□□□ -2.02
CCDC138Q96M89 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC138Q96M89 AC131280.1-202ENST00000624067 4211 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 Y_RNA.27-201ENST00000362540 103 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 Y_RNA.498-201ENST00000384460 102 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC138Q96M89 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC138Q96M89 RNU6-221P-201ENST00000459541 99 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 Y_RNA.631-201ENST00000459607 101 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 YWHAEP4-201ENST00000505390 198 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 SNORA40.9-201ENST00000515895 93 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 AC018448.1-201ENST00000552843 316 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 MIR3162-201ENST00000581818 82 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 AC005786.1-201ENST00000588553 154 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 AL357075.2-201ENST00000614906 189 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 MIR6817-201ENST00000615588 66 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 AC134503.1-201ENST00000633048 54 ntBASIC2.42□□□□□ -2.02
CCDC138Q96M89 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC138Q96M89 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC138Q96M89 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC138Q96M89 ZNF72P-201ENST00000425869 1908 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 RNU1-51P-201ENST00000365345 176 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 Y_RNA.394-201ENST00000383942 103 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 RNU6-474P-201ENST00000384243 107 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CCDC138Q96M89 RNA5SP508-201ENST00000411327 119 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 ELOCP21-201ENST00000412558 336 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 TOMM22P2-201ENST00000430735 237 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 AL160004.2-201ENST00000432935 350 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 AL121890.1-201ENST00000435457 205 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 MTND2P29-201ENST00000438595 412 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 AL353689.1-201ENST00000438895 199 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC138Q96M89 SNORA40.14-201ENST00000516543 86 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 SUMO2P18-201ENST00000518873 252 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC138Q96M89 U1.36-201ENST00000620684 176 ntBASIC2.41□□□□□ -2.02
CCDC138Q96M89 Y_RNA.31-201ENST00000362574 102 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 SNORA16B-201ENST00000364674 135 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 RNU6-1264P-201ENST00000383891 107 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 SNORD78.2-201ENST00000391076 69 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 MCFD2P1-201ENST00000417812 300 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 AC008134.1-201ENST00000420943 193 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms