Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL117342.1-201ENST00000404861 406 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU6-955P-201ENST00000410497 104 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU6-370P-201ENST00000411008 104 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RPL37P10-201ENST00000412884 288 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC074085.1-201ENST00000413598 418 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MRPS18CP6-201ENST00000423587 223 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.19□□□□□ -2.22
LINC00477Q96M19 AL357134.1-201ENST00000445848 426 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 HMGN2P23-201ENST00000456759 269 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 snoU13.30-201ENST00000458951 104 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU1-98P-201ENST00000458992 160 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNA5SP57-201ENST00000459463 123 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC091179.3-201ENST00000474761 144 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 UBL5P3-201ENST00000475112 231 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC046134.1-201ENST00000514454 666 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU1-117P-201ENST00000517041 158 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU1-54P-201ENST00000517181 120 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC016256.1-201ENST00000547971 354 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RRN3P3-201ENST00000549207 578 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR4422-201ENST00000581938 83 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR4801-201ENST00000582704 82 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 CYP2C61P-201ENST00000604072 290 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR1244-1-201ENST00000612829 85 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR6845-201ENST00000613182 61 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR1244-3-201ENST00000635744 85 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC068205.3-201ENST00000636385 468 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR1244-2-201ENST00000636449 85 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR1244-4-202ENST00000636813 85 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC112487.2-201ENST00000637950 304 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
LINC00477Q96M19 AC006026.1-201ENST00000444025 1803 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LINC00477Q96M19 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
LINC00477Q96M19 ZNF299P-201ENST00000406845 1804 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 BX322639.1-202ENST00000423987 2213 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 Y_RNA.58-201ENST00000362807 102 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 Y_RNA.106-201ENST00000363189 100 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNU6-23P-201ENST00000363283 107 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 Y_RNA.154-201ENST00000363624 102 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNU6-1188P-201ENST00000363795 107 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNU4-56P-201ENST00000364700 142 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNY3P1-201ENST00000365085 102 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 Y_RNA.319-201ENST00000365138 92 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNY3-201ENST00000365484 102 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNU6-1013P-201ENST00000384180 107 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 Y_RNA.490-201ENST00000384413 102 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 Y_RNA.529-201ENST00000384586 119 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 U8.13-201ENST00000390842 128 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 MIR1283-1-201ENST00000408494 87 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNA5SP100-201ENST00000410903 110 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNA5SP59-201ENST00000410922 110 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC098614.3-201ENST00000438957 440 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 CHEK2P4-201ENST00000450340 246 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC107399.1-201ENST00000451226 265 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC010409.1-201ENST00000487382 476 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RPS23P5-201ENST00000495419 428 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 PRDX4P1-201ENST00000507189 574 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNU6-875P-201ENST00000516488 106 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 RNU6-567P-201ENST00000516746 107 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AP000889.1-201ENST00000530968 660 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AP002001.1-203ENST00000534002 267 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 FRG2DP-202ENST00000566967 323 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 MIR4273-201ENST00000582824 84 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC013412.1-201ENST00000610687 192 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AL132765.2-201ENST00000610812 351 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC137590.2-201ENST00000619709 240 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.18□□□□□ -2.22
LINC00477Q96M19 MTND5P16-201ENST00000460269 1703 ntBASIC1.18□□□□□ -2.22
LINC00477Q96M19 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 MTND5P10-201ENST00000603719 1809 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC00477Q96M19 MIR424-201ENST00000362227 98 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 Y_RNA.70-201ENST00000362886 110 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 SNORD115-8-201ENST00000363856 82 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 RNU4-9P-201ENST00000364951 139 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 SNORD115-38-201ENST00000365037 82 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 MIR548B-201ENST00000385247 97 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 AL627390.1-201ENST00000396055 340 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
LINC00477Q96M19 AL357139.1-201ENST00000407792 426 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 RNU6-1001P-201ENST00000411265 100 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC00477Q96M19 AC009237.7-201ENST00000447357 229 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LINC00477Q96M19 RPL30P15-201ENST00000457129 321 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms