Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC091167.4-201ENST00000605079 184 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-CQ95604 U6.73-201ENST00000619194 103 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 AC009831.4-201ENST00000620744 325 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
HLA-CQ95604 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-CQ95604 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-CQ95604 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-CQ95604 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-CQ95604 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HLA-CQ95604 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-CQ95604 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-CQ95604 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-CQ95604 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-CQ95604 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
HLA-CQ95604 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-CQ95604 RNU6-294P-201ENST00000364999 102 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 RNU6-438P-201ENST00000365561 103 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 RNU6-1274P-201ENST00000384557 107 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 AC007064.1-201ENST00000412238 351 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 CALM2P4-201ENST00000430810 426 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 RN7SL601P-201ENST00000471221 293 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 SNORA31.1-201ENST00000515993 133 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 SNORA31.5-201ENST00000516190 133 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 PRELID2P1-201ENST00000552837 301 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 AC090115.4-201ENST00000609970 188 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 AC013412.1-201ENST00000610687 192 ntBASIC4.18□□□□□ -1.74
HLA-CQ95604 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HLA-CQ95604 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-CQ95604 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-CQ95604 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-CQ95604 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-CQ95604 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-CQ95604 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HLA-CQ95604 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HLA-CQ95604 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.17□□□□□ -1.74
HLA-CQ95604 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-CQ95604 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-CQ95604 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-CQ95604 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-CQ95604 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-CQ95604 RNU6-888P-201ENST00000363010 101 ntBASIC4.17□□□□□ -1.74
HLA-CQ95604 Y_RNA.544-201ENST00000384650 113 ntBASIC4.17□□□□□ -1.74
HLA-CQ95604 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
HLA-CQ95604 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.17□□□□□ -1.74
HLA-CQ95604 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-CQ95604 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-CQ95604 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-CQ95604 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-CQ95604 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-CQ95604 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-CQ95604 RNU6-944P-201ENST00000364023 107 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 Y_RNA.323-201ENST00000365157 109 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 RNU6-418P-201ENST00000384035 107 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 SNORA51.5-201ENST00000384126 131 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 MIR128-1-201ENST00000384921 82 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 RNA5SP252-201ENST00000391131 119 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-CQ95604 SNORA40.13-201ENST00000516379 120 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 RNU6-586P-201ENST00000517265 104 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 MIR3129-201ENST00000581095 76 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 MIR3117-201ENST00000584034 78 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-CQ95604 AC087685.1-201ENST00000587507 141 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 MIR432-201ENST00000606207 94 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 AL137067.1-201ENST00000615933 120 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.16□□□□□ -1.74
HLA-CQ95604 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-CQ95604 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
HLA-CQ95604 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-CQ95604 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-CQ95604 AC092435.4-201ENST00000623012 4159 ntBASIC4.15□□□□□ -1.74
HLA-CQ95604 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-CQ95604 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-CQ95604 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HLA-CQ95604 SNORD35B-201ENST00000363660 87 ntBASIC4.15□□□□□ -1.75
HLA-CQ95604 RNU1-44P-201ENST00000384453 163 ntBASIC4.15□□□□□ -1.75
HLA-CQ95604 RNA5SP281-201ENST00000516504 135 ntBASIC4.15□□□□□ -1.75
HLA-CQ95604 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-CQ95604 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-CQ95604 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-CQ95604 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-CQ95604 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-CQ95604 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-CQ95604 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-CQ95604 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-CQ95604 SNORA1-201ENST00000384107 130 ntBASIC4.14□□□□□ -1.75
HLA-CQ95604 SNORA26.2-201ENST00000390922 122 ntBASIC4.14□□□□□ -1.75
HLA-CQ95604 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-CQ95604 AC002075.2-201ENST00000425207 252 ntBASIC4.14□□□□□ -1.75
HLA-CQ95604 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-CQ95604 AC115115.1-201ENST00000449927 248 ntBASIC4.14□□□□□ -1.75
HLA-CQ95604 UBE2DNL-203ENST00000474922 222 ntBASIC4.14□□□□□ -1.75
HLA-CQ95604 MIR5187-201ENST00000583479 76 ntBASIC4.14□□□□□ -1.75
HLA-CQ95604 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-CQ95604 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-CQ95604 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-CQ95604 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HLA-CQ95604 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-CQ95604 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms