Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR5695-201ENST00000579717 85 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 MIR5006-201ENST00000583027 110 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 MIR3171-201ENST00000584270 74 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 AC005296.1-201ENST00000616145 209 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 AC012640.5-201ENST00000623897 319 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 AC008873.1-201ENST00000625051 138 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 MTND4P1-201ENST00000457501 1466 ntBASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-1301P-201ENST00000362724 104 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.80-201ENST00000362996 102 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 U8.2-201ENST00000363156 134 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.148-201ENST00000363557 117 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 SNORD31B-201ENST00000364977 69 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-793P-201ENST00000384233 104 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 RNY3P4-201ENST00000384428 101 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-1011P-201ENST00000384668 107 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 MIR1261-201ENST00000408659 82 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 SRIP3-201ENST00000413200 219 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AL163540.1-201ENST00000485382 386 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 ATP5EP1-201ENST00000510257 156 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 SNORA25.10-201ENST00000515926 124 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 CYCSP23-201ENST00000519781 313 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AC093023.1-201ENST00000547375 507 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AL442163.3-201ENST00000554110 156 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AC002984.1-201ENST00000591692 448 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AL356055.1-201ENST00000602528 446 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 SNORD11B-201ENST00000607707 90 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AC006157.1-201ENST00000611750 366 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 AC010999.1-201ENST00000611856 324 ntBASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
SLC44A1Q8WWI5 MTND5P6-201ENST00000422338 1798 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AC009487.4-201ENST00000624969 3585 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 RNY3P11-201ENST00000364153 102 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AC117470.1-201ENST00000381974 330 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 SNORA67.2-201ENST00000384300 149 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 MIR329-1-201ENST00000385028 80 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-308P-201ENST00000390957 107 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 MIR300-201ENST00000401138 83 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 MTCO3P19-201ENST00000415864 321 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AC112492.4-201ENST00000456549 352 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AC016925.1-201ENST00000458303 298 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 RNU7-14P-201ENST00000459331 62 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.683-201ENST00000516508 93 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 RN7SKP49-201ENST00000516675 260 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 RNU7-193P-201ENST00000516723 65 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 RNA5SP490-201ENST00000517141 136 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AL442663.2-201ENST00000554385 511 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 SNORD58B-201ENST00000607313 66 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AC083806.3-201ENST00000614016 455 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 AC007485.1-201ENST00000616755 206 ntBASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.1□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.179-201ENST00000363844 90 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 SNORA22B-201ENST00000383876 138 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-1145P-201ENST00000384246 107 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-318P-201ENST00000384283 103 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 MIR586-201ENST00000385035 97 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 MIR628-201ENST00000385229 95 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 RNU6-1001P-201ENST00000411265 100 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 RNA5SP270-201ENST00000411361 118 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 NDUFB4P10-201ENST00000452541 359 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 RNU7-169P-201ENST00000459456 61 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC091179.3-201ENST00000474761 144 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC093852.1-201ENST00000503587 266 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC093259.1-201ENST00000509755 300 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 SNORA4.4-201ENST00000515921 135 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC022868.1-201ENST00000517767 391 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 AC006600.1-201ENST00000572529 153 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 MIR3126-201ENST00000577443 74 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 MIR5188-201ENST00000583467 113 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 MIR6715A-201ENST00000615929 79 ntBASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SLC44A1Q8WWI5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SLC44A1Q8WWI5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.27-201ENST00000362540 103 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.202-201ENST00000364083 110 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-879P-201ENST00000364328 108 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-1026P-201ENST00000384465 108 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 MIR1283-1-201ENST00000408494 87 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms