Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU1-76P-201ENST00000362903 159 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 U3.13-201ENST00000364804 214 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 SNORA40C-201ENST00000391285 128 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 RNU2-64P-201ENST00000411315 191 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC023141.4-201ENST00000412031 328 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 AL117339.3-201ENST00000418733 162 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 RNU7-87P-201ENST00000459343 62 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC025465.3-201ENST00000510570 311 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 SNORA31.19-201ENST00000517079 126 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC034114.1-201ENST00000520293 285 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 AC073410.2-201ENST00000603240 332 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.29□□□□□ -2.04
SNED1Q8TER0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SNED1Q8TER0 RNU6-227P-201ENST00000362865 103 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 RNU5E-7P-201ENST00000365290 117 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 Y_RNA.358-201ENST00000365491 99 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 RNU6-209P-201ENST00000384118 107 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 Y_RNA.478-201ENST00000384358 107 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 RNU6-166P-201ENST00000384371 107 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 Y_RNA.562-201ENST00000384695 113 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 MIR190B-201ENST00000401119 79 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 MTCYBP2-201ENST00000407745 171 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 MIR548I3-201ENST00000408378 149 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 MIR548I1-201ENST00000408810 149 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.28□□□□□ -2.04
SNED1Q8TER0 RNU2-68P-201ENST00000410878 191 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 RPL21P38-201ENST00000418090 167 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 MTND5P15-201ENST00000434246 349 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.28□□□□□ -2.04
SNED1Q8TER0 MTND2P29-201ENST00000438595 412 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 RPEP5-201ENST00000441137 268 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 AL078601.1-201ENST00000444542 271 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 AC013470.1-201ENST00000453438 462 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.28□□□□□ -2.04
SNED1Q8TER0 RPL30P10-201ENST00000488148 337 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 AC005840.1-201ENST00000498412 377 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 RNU7-175P-201ENST00000515915 61 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.28□□□□□ -2.04
SNED1Q8TER0 AC012433.1-201ENST00000588916 398 ntBASIC2.28□□□□□ -2.04
SNED1Q8TER0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNED1Q8TER0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
SNED1Q8TER0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SNED1Q8TER0 MIR337-201ENST00000362281 93 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 Y_RNA.27-201ENST00000362540 103 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 RNY1P10-201ENST00000363268 113 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 Y_RNA.123-201ENST00000363338 102 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 SNORA38-201ENST00000363946 132 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 Y_RNA.405-201ENST00000383979 100 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 Y_RNA.451-201ENST00000384200 100 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 Y_RNA.524-201ENST00000384564 100 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 Y_RNA.561-201ENST00000384694 100 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 SNORA12.2-201ENST00000391040 156 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 RNU6-121P-201ENST00000410525 99 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 RNU6-130P-201ENST00000411112 103 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 MTCO3P29-201ENST00000432119 779 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 SUMO1P3-201ENST00000439961 304 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 AC010186.2-204ENST00000537668 439 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.27□□□□□ -2.05
SNED1Q8TER0 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 MIR4446-201ENST00000578505 67 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.27□□□□□ -2.05
SNED1Q8TER0 U6.99-201ENST00000637524 83 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.27□□□□□ -2.05
SNED1Q8TER0 AC110491.1-201ENST00000562191 2010 ntBASIC2.27□□□□□ -2.05
SNED1Q8TER0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
SNED1Q8TER0 SNORD27-201ENST00000363981 72 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 Y_RNA.540-201ENST00000384638 111 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 MIR215-201ENST00000384858 110 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 BPY2DP-201ENST00000422208 265 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AL590135.1-201ENST00000422215 156 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AC096920.1-201ENST00000423991 241 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 SNRPEP9-201ENST00000436794 238 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.26□□□□□ -2.05
SNED1Q8TER0 AC098831.1-201ENST00000440661 216 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AC079354.2-201ENST00000453523 154 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 RPS29P27-201ENST00000463711 170 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AC025033.1-201ENST00000463883 194 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AC107626.1-201ENST00000471084 183 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AC107393.1-201ENST00000512403 346 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 Y_RNA.706-201ENST00000516933 99 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 RNU6-111P-201ENST00000517179 105 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 MIR3199-2-201ENST00000636243 86 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 U4.7-201ENST00000638126 106 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNED1Q8TER0 AC131280.1-202ENST00000624067 4211 ntBASIC2.26□□□□□ -2.05
SNED1Q8TER0 AL391987.6-201ENST00000305671 199 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms