Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-58P-201ENST00000517143 103 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 SNORA31.21-201ENST00000517180 77 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 AC090616.3-201ENST00000582184 217 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 AC008873.1-201ENST00000625051 138 ntBASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SH3RF3Q8TEJ3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.182-201ENST00000363880 111 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 SNORD32A-201ENST00000364805 84 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.319-201ENST00000365138 92 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.357-201ENST00000365487 109 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 YWHAEP4-201ENST00000505390 198 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.686-201ENST00000516548 134 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 SNORA43.2-201ENST00000516652 128 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 AC107294.3-201ENST00000609211 526 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 AL391516.1-201ENST00000554380 2449 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 AC068700.1-201ENST00000565862 3754 ntBASIC3.24□□□□□ -1.89
SH3RF3Q8TEJ3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.101-201ENST00000363154 102 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-275P-201ENST00000364910 107 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 Z98749.2-208ENST00000381646 500 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 SNORA20-201ENST00000384662 132 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 MIR325-201ENST00000385260 98 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 RPL23AP95-201ENST00000426806 265 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 AC005042.3-201ENST00000453230 174 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 Y_RNA.637-201ENST00000459424 114 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 AP002001.1-203ENST00000534002 267 ntBASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SH3RF3Q8TEJ3 AC110491.1-201ENST00000562191 2010 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 MIR26A1-201ENST00000362205 77 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 RNU4-82P-201ENST00000362443 140 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 RNU1-105P-201ENST00000363470 161 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 RNU6-137P-201ENST00000363680 108 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 SNORD115-8-201ENST00000363856 82 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 SNORD115-38-201ENST00000365037 82 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 RNA5SP126-201ENST00000365092 109 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 RN7SKP284-201ENST00000411002 343 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 AC098614.2-201ENST00000426040 255 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 PTGES3P4-201ENST00000426243 356 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 snoU13.28-201ENST00000459235 104 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 SNORA25.12-201ENST00000516202 82 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 RNA5SP290-201ENST00000517133 127 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 SCARNA4-202ENST00000625402 129 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 MIR3658-201ENST00000636291 56 ntBASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3RF3Q8TEJ3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 SNORA63.4-201ENST00000362763 126 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-942P-201ENST00000363002 107 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 RNU4-17P-201ENST00000365598 141 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-541P-201ENST00000384709 110 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-381P-201ENST00000391259 108 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 AC092047.1-201ENST00000424997 240 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 BTF3P11-201ENST00000426582 477 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 AC010095.1-201ENST00000443543 144 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-928P-201ENST00000516876 104 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 AL359693.1-201ENST00000614959 2407 ntBASIC3.21□□□□□ -1.9
SH3RF3Q8TEJ3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-834P-201ENST00000362367 110 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 RNU4-11P-201ENST00000365287 132 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-429P-201ENST00000384582 108 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 Y_RNA.542-201ENST00000384641 111 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 MIR518D-201ENST00000385014 87 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 RNY4P18-201ENST00000391107 89 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-1211P-201ENST00000459179 105 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 RNU7-23P-201ENST00000459465 62 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 AC100767.1-201ENST00000528178 123 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 MIR5571-201ENST00000577998 113 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 360.5 ms