Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR4276-201ENST00000584832 70 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 RPL30P11-203ENST00000598995 310 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 uc_338.28-201ENST00000612082 187 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 AL136964.1-201ENST00000622038 2990 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 U3.8-201ENST00000363675 217 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 MIRLET7F2-201ENST00000385277 83 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 RPS26P45-201ENST00000471748 340 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 RN7SL504P-201ENST00000494496 287 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 PHBP14-201ENST00000512887 367 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-781P-201ENST00000516377 101 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 SCARNA13-201ENST00000516672 275 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-197P-201ENST00000516680 100 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 RNU2-60P-201ENST00000517290 128 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SHKBP1Q8TBC3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-600P-201ENST00000362524 99 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 SNORA7.2-201ENST00000364446 145 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 SNORA18.2-201ENST00000383865 132 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 MIR548A1-201ENST00000385041 97 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 MIR548B-201ENST00000385247 97 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 AL139281.1-201ENST00000422120 335 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 HMGN2P20-201ENST00000437531 273 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 MIR5680-201ENST00000577577 84 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 AC091178.2-201ENST00000584401 117 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 Z83843.1-201ENST00000604070 3685 ntBASIC3.56□□□□□ -1.84
SHKBP1Q8TBC3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 RNU4-15P-201ENST00000362613 141 ntBASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 Y_RNA.649-201ENST00000459077 103 ntBASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 AC131055.1-201ENST00000584626 316 ntBASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 AP003357.1-201ENST00000604497 148 ntBASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 AP001486.2-201ENST00000561652 5113 ntBASIC3.55□□□□□ -1.84
SHKBP1Q8TBC3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 SNORD114-7-201ENST00000362520 77 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 RNA5SP374-201ENST00000362939 125 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 Y_RNA.124-201ENST00000363339 93 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-529P-201ENST00000363383 104 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-647P-201ENST00000364243 107 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-106P-201ENST00000384405 107 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 Y_RNA.587-201ENST00000391210 103 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 AL603914.1-201ENST00000401964 204 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 RN7SKP101-201ENST00000411376 320 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 RN7SKP19-201ENST00000516016 252 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 RNU2-44P-201ENST00000516795 194 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 AC026333.2-201ENST00000542164 106 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 AL160236.1-201ENST00000556317 195 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 AC105137.2-201ENST00000569073 466 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 AC106754.2-201ENST00000623006 233 ntBASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHKBP1Q8TBC3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 U8.6-201ENST00000364939 135 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-484P-201ENST00000384016 107 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-905P-201ENST00000384434 107 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 RNU6-19P-201ENST00000384718 107 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 MIR518C-201ENST00000384822 101 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 U6atac.2-201ENST00000408644 118 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 AC006989.1-201ENST00000427212 131 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 RNU7-170P-201ENST00000459303 61 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 SRIP1-201ENST00000489235 288 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 Y_RNA.690-201ENST00000516603 95 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 MIR2276-201ENST00000516886 89 ntBASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms