Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL137100.2-201ENST00000555786 315 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 Y_RNA.159-201ENST00000363674 87 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 RNU6-1240P-201ENST00000365155 104 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 AC002429.1-201ENST00000437672 148 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 AC245047.7-201ENST00000440265 293 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 U8.21-201ENST00000459536 136 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 AF186996.7-201ENST00000492781 209 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 RNU7-128P-201ENST00000517247 62 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 SCARNA4-201ENST00000629045 128 ntBASIC0.69□□□□□ -2.3
CLHC1Q8NHS4 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 RNY3P10-201ENST00000384764 102 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 MRPL42P3-201ENST00000401492 326 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AL390237.1-201ENST00000404226 1415 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 RPS3AP1-201ENST00000413190 320 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 MTND3P9-201ENST00000429526 346 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC073415.1-201ENST00000449240 153 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 MTCO3P38-201ENST00000468910 766 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC048334.1-201ENST00000477975 159 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC105758.1-201ENST00000506038 399 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 MTND4P7-201ENST00000523876 130 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 MRPS36P4-201ENST00000534436 298 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AL162424.1-201ENST00000602325 221 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC097065.2-201ENST00000608159 533 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC064836.2-201ENST00000609491 462 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC109347.2-201ENST00000610220 349 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 uc_338.34-201ENST00000617467 174 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AC072046.2-201ENST00000618366 268 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 MIR7111-201ENST00000619751 72 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 AL078596.1-201ENST00000624856 447 ntBASIC0.68□□□□□ -2.3
CLHC1Q8NHS4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 Y_RNA.124-201ENST00000363339 93 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 MIR660-201ENST00000385235 97 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 RNU6-440P-201ENST00000390882 105 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AL049545.1-201ENST00000401856 572 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 RNA5SP504-201ENST00000410676 117 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 MTCYBP8-201ENST00000422855 651 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AL031667.1-201ENST00000440222 725 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC060788.1-201ENST00000521318 469 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AL590705.4-201ENST00000532209 134 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 MIR3913-1-201ENST00000577744 102 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC087683.2-201ENST00000611384 326 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC073349.3-201ENST00000617616 186 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC103705.1-201ENST00000619013 241 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 AC137590.2-201ENST00000619709 240 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.67□□□□□ -2.3
CLHC1Q8NHS4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-82P-201ENST00000363970 107 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-996P-201ENST00000365438 107 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-1329P-201ENST00000365664 107 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-17P-201ENST00000384245 107 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-18P-201ENST00000384527 107 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 SNORD41-201ENST00000386967 70 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 MT-TH-201ENST00000387441 69 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNA5SP219-201ENST00000390940 113 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AL034345.1-201ENST00000407768 123 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 MIR320B2-201ENST00000408479 138 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC245047.3-201ENST00000429428 127 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 MTCO2P18-201ENST00000457151 658 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-322P-201ENST00000516010 103 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-922P-201ENST00000516753 99 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RNU6-430P-201ENST00000517078 107 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC087854.1-201ENST00000519706 414 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC016957.1-201ENST00000534895 309 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AL121579.1-201ENST00000555129 305 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC087683.1-201ENST00000591187 441 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC008536.2-201ENST00000607284 349 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 RMST_3.1-201ENST00000611651 109 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC106754.2-201ENST00000623006 233 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 AC007494.3-201ENST00000624660 743 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 SNORD3E-202ENST00000627253 216 ntBASIC0.66□□□□□ -2.3
CLHC1Q8NHS4 Y_RNA.123-201ENST00000363338 102 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 RNU6-1317P-201ENST00000364582 104 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 RNU6-784P-201ENST00000384330 106 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms