Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RNU6-440P-201ENST00000390882 105 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AL049545.1-201ENST00000401856 572 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 MTND1P27-201ENST00000451117 902 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 RNU6-189P-201ENST00000516120 101 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 RN7SKP49-201ENST00000516675 260 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 RNU6-430P-201ENST00000517078 107 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AC004223.2-201ENST00000590309 544 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AC087683.1-201ENST00000591187 441 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 Z94722.1-201ENST00000604328 474 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AC106800.4-201ENST00000614905 153 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AC073349.3-201ENST00000617616 186 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AC103705.1-201ENST00000619013 241 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AL603755.1-201ENST00000619504 163 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 AC018630.2-201ENST00000534866 2403 ntBASIC0.85□□□□□ -2.27
CCDC148Q8NFR7 RNU6-1317P-201ENST00000364582 104 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 AL606923.1-201ENST00000406616 190 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 AC245047.3-201ENST00000429428 127 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 AF186996.7-201ENST00000492781 209 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 PDCD5P2-201ENST00000507570 312 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 RN7SKP287-201ENST00000516546 266 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 MRPS36P4-201ENST00000534436 298 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 SNORD3E-202ENST00000627253 216 ntBASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 FER-210ENST00000628534 558 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC148Q8NFR7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.84□□□□□ -2.28
CCDC148Q8NFR7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CCDC148Q8NFR7 RNU4-76P-201ENST00000364509 141 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 MIR660-201ENST00000385235 97 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 RPS4XP11-201ENST00000446897 772 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 RNU7-94P-201ENST00000459576 63 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AC105758.1-201ENST00000506038 399 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AC136628.3-201ENST00000521868 290 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 AC093424.1-201ENST00000604999 338 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 RMST_3.1-201ENST00000611651 109 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 OR5AK4P-201ENST00000635912 903 ntBASIC0.83□□□□□ -2.28
CCDC148Q8NFR7 RNU6-245P-201ENST00000384020 107 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 RNU6-784P-201ENST00000384330 106 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 MIR653-201ENST00000385279 96 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AL606490.4-201ENST00000423117 127 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AL358934.1-201ENST00000432346 324 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 NDUFB4P10-201ENST00000452541 359 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 RPS29P1-201ENST00000465274 159 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 RNA5SP168-201ENST00000516642 112 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 RNU6-922P-201ENST00000516753 99 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 RNA5SP54-201ENST00000516951 92 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AC025423.5-201ENST00000550230 219 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AL137100.2-201ENST00000555786 315 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AC022432.1-201ENST00000595739 310 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 SNORD11B-201ENST00000607707 90 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 MIR8076-201ENST00000611401 83 ntBASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC148Q8NFR7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 TPTE2P5-203ENST00000458118 728 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 RNU7-99P-201ENST00000516271 62 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 RNU6-197P-201ENST00000516680 100 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 RNU7-128P-201ENST00000517247 62 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 AC090142.3-201ENST00000519012 385 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 MTND1P35-201ENST00000526739 508 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 AC068790.6-201ENST00000602558 258 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
CCDC148Q8NFR7 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 SNORD115-8-201ENST00000363856 82 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 SNORD115-38-201ENST00000365037 82 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 RNU6-1103P-201ENST00000384150 107 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 SNORA12.1-201ENST00000390873 148 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 AC114482.1-201ENST00000418010 247 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 HMGB1P29-201ENST00000505659 499 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 AC104576.1-201ENST00000524225 88 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 AL590705.4-201ENST00000532209 134 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 AC011604.1-201ENST00000545978 196 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 MTND1P24-201ENST00000552175 861 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 AL157687.1-201ENST00000554853 619 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 CPDP1-201ENST00000579660 283 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 AL354950.2-201ENST00000617939 290 ntBASIC0.8□□□□□ -2.28
CCDC148Q8NFR7 U6.73-201ENST00000619194 103 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms