Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORA12.2-201ENST00000391040 156 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC233266.1-201ENST00000454518 96 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC109810.1-201ENST00000534066 224 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 MIR3684-201ENST00000579779 74 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AP001836.1-201ENST00000604675 523 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC242852.1-201ENST00000612151 96 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AL512506.1-201ENST00000613918 449 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC244015.1-201ENST00000622301 99 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU6-527P-201ENST00000363425 104 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU4-9P-201ENST00000364951 139 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU6-142P-201ENST00000384019 107 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 SNORA24.1-201ENST00000384401 135 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU6-933P-201ENST00000384424 107 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 MIR1283-1-201ENST00000408494 87 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 MIR1185-1-201ENST00000408598 86 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC122133.1-201ENST00000613964 233 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 TCL6_2.1-201ENST00000615162 119 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.399-201ENST00000383955 105 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MIR562-201ENST00000384894 95 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MRPL42P2-201ENST00000403169 426 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MTND4LP11-201ENST00000422184 280 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC079781.2-201ENST00000446424 169 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC067940.1-201ENST00000458411 300 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU4-54P-201ENST00000516428 129 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-685P-201ENST00000517088 95 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-1096P-201ENST00000517089 102 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC064872.1-201ENST00000604823 1072 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL359075.3-201ENST00000613288 217 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL390237.1-201ENST00000404226 1415 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-517P-201ENST00000384362 110 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 C1DP2-201ENST00000418167 426 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC090960.1-201ENST00000421072 306 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AP003168.1-201ENST00000530091 307 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC138749.5-201ENST00000611461 208 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC116165.2-201ENST00000616705 206 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 uc_338.34-201ENST00000617467 174 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC024940.5-201ENST00000622889 474 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL445984.1-201ENST00000637834 659 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-1317P-201ENST00000364582 104 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-1126P-201ENST00000384002 107 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-439P-201ENST00000384188 106 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC063976.4-201ENST00000421971 163 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC091874.1-201ENST00000511402 339 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-341P-201ENST00000516973 96 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC025647.1-201ENST00000517879 253 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 SUB1P2-201ENST00000556401 297 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC240442.1-201ENST00000616055 283 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC103706.2-201ENST00000638080 240 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-923P-201ENST00000364753 107 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 ELOCP4-201ENST00000420090 333 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-138P-201ENST00000515952 107 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 SCARNA16.2-201ENST00000516520 172 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC090142.3-201ENST00000519012 385 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC026470.2-201ENST00000561492 181 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC092954.2-201ENST00000609103 430 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MIR8054-201ENST00000620877 86 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL603839.4-201ENST00000624658 1005 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC126544.2-201ENST00000625174 749 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC099654.13-201ENST00000639774 207 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MIR377-201ENST00000362145 69 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 SNORD114-31-201ENST00000363219 75 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 SNORD56.2-201ENST00000363242 71 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNA5SP48-201ENST00000363969 126 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL117351.1-201ENST00000438864 766 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MTND1P5-201ENST00000517906 940 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC123904.2-201ENST00000548059 300 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC008088.1-201ENST00000580993 280 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC130324.3-201ENST00000614165 542 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL078595.3-201ENST00000623815 1166 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MIR4320-201ENST00000636981 65 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC121333.1-201ENST00000567488 2709 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MIR340-201ENST00000362125 95 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNA5SP361-201ENST00000362686 118 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNY4P7-201ENST00000364600 96 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-424P-201ENST00000384367 105 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MTATP6P16-201ENST00000434543 526 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MTATP6P14-201ENST00000455189 673 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNA5SP437-201ENST00000517249 129 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC010525.2-201ENST00000590920 195 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms