Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RNU6-727P-201ENST00000363592 107 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.158-201ENST00000363651 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 U3.8-201ENST00000363675 217 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AL359511.1-201ENST00000402970 211 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 SDAD1P3-201ENST00000427380 333 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 CR769767.1-201ENST00000436337 346 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 RNU7-193P-201ENST00000516723 65 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.713-201ENST00000517013 96 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.812-201ENST00000610788 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.784-201ENST00000613803 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.787-201ENST00000616522 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.780-201ENST00000617336 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.801-201ENST00000619005 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 MIR6073-201ENST00000352083 89 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 SNORD115-3-201ENST00000363100 82 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 SNORA33.2-201ENST00000365413 134 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-639P-201ENST00000384074 107 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 SNORA67.2-201ENST00000384300 149 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 HMGN2P9-201ENST00000476875 229 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-948P-201ENST00000516374 107 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP24-201ENST00000516478 95 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AC022616.4-201ENST00000522985 181 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AL390123.1-201ENST00000603216 237 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 ZNF271P-202ENST00000465539 1970 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP289-201ENST00000362332 137 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 SNORA63.7-201ENST00000365579 123 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 SNORA51.11-201ENST00000384442 131 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 MIR524-201ENST00000385242 87 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-101P-201ENST00000410323 104 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-41P-201ENST00000516161 162 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-48P-201ENST00000516400 162 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 AC040926.1-201ENST00000530195 238 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 AP003072.1-201ENST00000531740 145 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 ZNF72P-201ENST00000425869 1908 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC091812.1-201ENST00000432235 1948 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP456-201ENST00000364002 114 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-160P-201ENST00000384591 107 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP210-201ENST00000391034 120 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 MRPL35P1-201ENST00000404272 572 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AL357134.1-201ENST00000445848 426 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RN7SL636P-201ENST00000497504 294 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 SNORA40.9-201ENST00000515895 93 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC009127.3-201ENST00000570531 403 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC006504.6-201ENST00000590142 199 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AL049779.4-201ENST00000604500 156 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AL121655.1-201ENST00000605811 308 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC130454.1-201ENST00000622948 401 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.216-201ENST00000364205 93 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SNORD114-30-201ENST00000364448 72 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.326-201ENST00000365176 113 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-138P-201ENST00000384093 164 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SNORA70B-201ENST00000384210 135 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-975P-201ENST00000384296 105 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.485-201ENST00000384395 102 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 HMGN2P39-201ENST00000398005 273 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP504-201ENST00000410676 117 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU4-53P-201ENST00000410828 140 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 TOMM22P2-201ENST00000430735 237 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 AC067942.3-201ENST00000512025 362 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1012P-201ENST00000516606 109 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-107P-201ENST00000516643 102 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SNORA31.25-201ENST00000517242 134 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 AC087441.2-201ENST00000529141 262 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 MIR5092-201ENST00000583139 88 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 AC080100.1-201ENST00000624239 5356 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.389-201ENST00000383924 113 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1310P-201ENST00000384153 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 SNORA3.2-201ENST00000408221 125 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-131P-201ENST00000458943 161 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-498P-201ENST00000459468 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU7-57P-201ENST00000459540 60 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP402-201ENST00000517148 110 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 AC018448.1-201ENST00000552843 316 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms