Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RNU6-727P-201ENST00000363592 107 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.158-201ENST00000363651 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 U3.8-201ENST00000363675 217 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AL359511.1-201ENST00000402970 211 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 SDAD1P3-201ENST00000427380 333 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 CR769767.1-201ENST00000436337 346 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 RNU7-193P-201ENST00000516723 65 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.713-201ENST00000517013 96 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.812-201ENST00000610788 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.784-201ENST00000613803 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.787-201ENST00000616522 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.780-201ENST00000617336 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.801-201ENST00000619005 101 ntBASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.9□□□□□ -1.95
PRPF38AQ8NAV1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 MIR6073-201ENST00000352083 89 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 SNORD115-3-201ENST00000363100 82 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 SNORA33.2-201ENST00000365413 134 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-639P-201ENST00000384074 107 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 SNORA67.2-201ENST00000384300 149 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 HMGN2P9-201ENST00000476875 229 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-948P-201ENST00000516374 107 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP24-201ENST00000516478 95 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AC022616.4-201ENST00000522985 181 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 AL390123.1-201ENST00000603216 237 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 ZNF271P-202ENST00000465539 1970 ntBASIC2.89□□□□□ -1.95
PRPF38AQ8NAV1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP289-201ENST00000362332 137 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 SNORA63.7-201ENST00000365579 123 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 SNORA51.11-201ENST00000384442 131 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 MIR524-201ENST00000385242 87 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-101P-201ENST00000410323 104 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-41P-201ENST00000516161 162 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-48P-201ENST00000516400 162 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 AC040926.1-201ENST00000530195 238 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 AP003072.1-201ENST00000531740 145 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.88□□□□□ -1.95
PRPF38AQ8NAV1 ZNF72P-201ENST00000425869 1908 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC091812.1-201ENST00000432235 1948 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP456-201ENST00000364002 114 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-160P-201ENST00000384591 107 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP210-201ENST00000391034 120 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 MRPL35P1-201ENST00000404272 572 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AL357134.1-201ENST00000445848 426 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 RN7SL636P-201ENST00000497504 294 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 SNORA40.9-201ENST00000515895 93 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC009127.3-201ENST00000570531 403 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC006504.6-201ENST00000590142 199 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AL049779.4-201ENST00000604500 156 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AL121655.1-201ENST00000605811 308 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 AC130454.1-201ENST00000622948 401 ntBASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.216-201ENST00000364205 93 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SNORD114-30-201ENST00000364448 72 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.326-201ENST00000365176 113 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-138P-201ENST00000384093 164 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SNORA70B-201ENST00000384210 135 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-975P-201ENST00000384296 105 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.485-201ENST00000384395 102 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 HMGN2P39-201ENST00000398005 273 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP504-201ENST00000410676 117 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU4-53P-201ENST00000410828 140 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 TOMM22P2-201ENST00000430735 237 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 AC067942.3-201ENST00000512025 362 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1012P-201ENST00000516606 109 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-107P-201ENST00000516643 102 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SNORA31.25-201ENST00000517242 134 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 AC087441.2-201ENST00000529141 262 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 MIR5092-201ENST00000583139 88 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.86□□□□□ -1.95
PRPF38AQ8NAV1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 AC080100.1-201ENST00000624239 5356 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 Y_RNA.389-201ENST00000383924 113 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1310P-201ENST00000384153 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 SNORA3.2-201ENST00000408221 125 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU1-131P-201ENST00000458943 161 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU6-498P-201ENST00000459468 107 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNU7-57P-201ENST00000459540 60 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 RNA5SP402-201ENST00000517148 110 ntBASIC2.85□□□□□ -1.95
PRPF38AQ8NAV1 AC018448.1-201ENST00000552843 316 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms