Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MTND4P12-201ENST00000498999 1377 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 SNORD114-1-201ENST00000362705 72 ntBASIC1.71□□□□□ -2.14
CCDC89Q8N998 RNU6-793P-201ENST00000384233 104 ntBASIC1.71□□□□□ -2.14
CCDC89Q8N998 RNU6-306P-201ENST00000384617 107 ntBASIC1.71□□□□□ -2.14
CCDC89Q8N998 RPL30P16-201ENST00000419341 429 ntBASIC1.71□□□□□ -2.14
CCDC89Q8N998 FO393415.2-201ENST00000480085 343 ntBASIC1.71□□□□□ -2.14
CCDC89Q8N998 MTCYBP18-201ENST00000501056 747 ntBASIC1.71□□□□□ -2.14
CCDC89Q8N998 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC89Q8N998 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC89Q8N998 AC100810.6-201ENST00000638068 285 ntBASIC1.71□□□□□ -2.14
CCDC89Q8N998 RNU6-1266P-201ENST00000362794 105 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 SNORD87-201ENST00000364849 89 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC89Q8N998 EIF1P1-201ENST00000421436 341 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 AL135790.2-201ENST00000437701 267 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.7□□□□□ -2.14
CCDC89Q8N998 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC89Q8N998 RNU6-273P-201ENST00000516937 96 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 AC019176.1-201ENST00000518519 225 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC89Q8N998 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC89Q8N998 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.7□□□□□ -2.14
CCDC89Q8N998 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC89Q8N998 Y_RNA.179-201ENST00000363844 90 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 Y_RNA.295-201ENST00000364918 102 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 RNA5SP109-201ENST00000391010 116 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 RPL21P1-201ENST00000399532 476 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 AC243428.1-201ENST00000421099 264 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC89Q8N998 RNU1-54P-201ENST00000517181 120 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 RNA5SP454-201ENST00000517231 127 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 AL590705.4-201ENST00000532209 134 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 AL137100.2-201ENST00000555786 315 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 AC005668.1-201ENST00000571142 476 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC89Q8N998 MIR4742-201ENST00000581069 85 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 AL078604.3-201ENST00000615580 211 ntBASIC1.69□□□□□ -2.14
CCDC89Q8N998 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CCDC89Q8N998 Y_RNA.3-201ENST00000362331 103 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 RNU6-727P-201ENST00000363592 107 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 SNORD26-201ENST00000384147 75 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 Y_RNA.490-201ENST00000384413 102 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 RNU6-174P-201ENST00000410406 106 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 RN7SKP101-201ENST00000411376 320 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 USMG5P1-201ENST00000425964 177 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 AL445305.1-201ENST00000432577 575 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 AC091179.3-201ENST00000474761 144 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 AL442163.3-201ENST00000554110 156 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 UBL5P4-201ENST00000562584 236 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 SUB1P3-201ENST00000564581 315 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC89Q8N998 ZNF299P-201ENST00000406845 1804 ntBASIC1.68□□□□□ -2.14
CCDC89Q8N998 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC89Q8N998 RNU6-1123P-201ENST00000362347 106 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 Y_RNA.415-201ENST00000384012 112 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 Y_RNA.453-201ENST00000384223 109 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 RNU6-831P-201ENST00000384548 107 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 Y_RNA.533-201ENST00000384596 114 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 MIR513A1-201ENST00000385138 129 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 RPL30P13-201ENST00000418873 348 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 SNX2P2-201ENST00000424553 323 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC89Q8N998 UBL5P3-201ENST00000475112 231 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 RNU6-566P-201ENST00000516790 107 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC89Q8N998 AC022432.1-201ENST00000595739 310 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 AC093913.1-201ENST00000614178 329 ntBASIC1.67□□□□□ -2.14
CCDC89Q8N998 MTND5P10-201ENST00000603719 1809 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 RNU6-595P-201ENST00000363944 107 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC89Q8N998 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC89Q8N998 AC093303.1-201ENST00000514549 295 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 RNU6-250P-201ENST00000516958 103 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 RAB11AP2-201ENST00000545905 639 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 MIR4255-201ENST00000579351 72 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 uc_338.5-201ENST00000611839 155 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 AC040896.1-201ENST00000613819 479 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC89Q8N998 MIR3662-201ENST00000637030 95 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 U6.108-201ENST00000637764 58 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 AC068137.4-201ENST00000638485 296 ntBASIC1.66□□□□□ -2.14
CCDC89Q8N998 Y_RNA.318-201ENST00000365131 97 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 Y_RNA.405-201ENST00000383979 100 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 Y_RNA.451-201ENST00000384200 100 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 Y_RNA.524-201ENST00000384564 100 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 Y_RNA.561-201ENST00000384694 100 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 RNU6-955P-201ENST00000410497 104 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 RN7SKP200-201ENST00000410564 320 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 RN7SKP51-201ENST00000410781 304 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 AL139396.1-201ENST00000421137 167 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC89Q8N998 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC89Q8N998 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC89Q8N998 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC89Q8N998 MTND1P17-201ENST00000448961 204 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms