Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 MTND5P32-201ENST00000560711 1802 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 SNORA5B-201ENST00000363786 132 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 Y_RNA.337-201ENST00000365312 102 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 Y_RNA.415-201ENST00000384012 112 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 MT-TT-201ENST00000387460 66 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1064P-201ENST00000410626 104 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 AC019205.3-201ENST00000424573 156 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 AL121914.1-201ENST00000450188 156 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 RNU7-197P-201ENST00000458836 62 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 UBE2DNL-203ENST00000474922 222 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 AC092991.1-201ENST00000477176 376 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 SNORA31.23-201ENST00000517219 133 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 MTND5P34-201ENST00000568888 325 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 AC013791.1-201ENST00000616619 62 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 MIR6076-201ENST00000617521 113 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.12□□□□□ -1.91
TTC9BQ8N6N2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RNU6-778P-201ENST00000363269 103 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RNU6-884P-201ENST00000363889 107 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RNU6-270P-201ENST00000364131 105 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RNU6-454P-201ENST00000364292 107 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 Y_RNA.294-201ENST00000364916 102 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RNU6-969P-201ENST00000383900 105 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1310P-201ENST00000384153 107 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 SNORA8.3-201ENST00000384679 139 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RN7SKP61-201ENST00000410642 295 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 HMGN2P30-201ENST00000423237 256 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RPL39P29-201ENST00000447779 157 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 RPL30P14-201ENST00000482744 348 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AL391813.1-201ENST00000603098 260 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 MIR3529-201ENST00000637713 78 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AC010329.5-201ENST00000623497 2174 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
TTC9BQ8N6N2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RNU6-103P-201ENST00000363686 107 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1180P-201ENST00000364935 107 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RNU1-73P-201ENST00000383971 164 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RNU6-476P-201ENST00000384726 107 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 MIR626-201ENST00000385032 94 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 AC012308.1-201ENST00000451232 178 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 AP002884.2-201ENST00000471647 395 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RN7SL442P-201ENST00000473804 320 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 AC090525.1-201ENST00000479116 478 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RPS29P20-201ENST00000489592 171 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RNA5SP356-201ENST00000515972 94 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RNU6-561P-201ENST00000516222 102 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 RNU2-12P-201ENST00000517216 168 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 GTF3AP2-201ENST00000557014 266 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 MIR3613-201ENST00000579844 87 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 AL356157.2-201ENST00000605122 111 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 FTX_3.1-201ENST00000610451 147 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 U2.21-201ENST00000637295 81 ntBASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TTC9BQ8N6N2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 AC092268.1-201ENST00000342691 405 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 RNU6-834P-201ENST00000362367 110 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 SNORD87-201ENST00000364849 89 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 Y_RNA.287-201ENST00000364853 94 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 SNORA22-201ENST00000383907 134 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 SNORA1.3-201ENST00000384676 136 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 RNU6-768P-201ENST00000384683 107 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 MIR208B-201ENST00000401172 77 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 MTATP6P7-201ENST00000453315 681 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 AC016925.1-201ENST00000458303 298 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 AC103975.1-201ENST00000482506 483 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 RPL23AP94-201ENST00000512518 302 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 SNORD59.2-201ENST00000516873 68 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 CYCSP23-201ENST00000519781 313 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 AP001328.1-201ENST00000528550 176 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 AC079600.2-201ENST00000550076 130 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 AC127455.1-201ENST00000565496 145 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms