Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.101-201ENST00000363154 102 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RNU5F-3P-201ENST00000363767 117 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-378P-201ENST00000384324 107 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 SNORA46.1-201ENST00000391069 153 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RNU2-49P-201ENST00000410666 184 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RNA5SP38-201ENST00000410750 119 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AIMP1P2-201ENST00000425294 312 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RAB28P5-201ENST00000427490 651 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 POLR2KP2-201ENST00000438155 177 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AC009237.7-201ENST00000447357 229 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 UQCRBP2-201ENST00000447827 297 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AC005042.3-201ENST00000453230 174 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AC074198.2-201ENST00000508153 258 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-861P-201ENST00000516745 106 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 RN7SKP282-201ENST00000516824 299 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 CYCSP23-201ENST00000519781 313 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AC010620.2-201ENST00000600135 313 ntBASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC44A3Q8N4M1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.84□□□□□ -1.96
SLC44A3Q8N4M1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SLC44A3Q8N4M1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 AC099654.7-201ENST00000635788 2127 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-529P-201ENST00000363383 104 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.179-201ENST00000363844 90 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-187P-201ENST00000384139 106 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-793P-201ENST00000384233 104 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-198P-201ENST00000384258 104 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-1289P-201ENST00000384431 106 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-125P-201ENST00000384505 107 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-918P-201ENST00000391219 106 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.590-201ENST00000410140 107 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RPL23AP36-201ENST00000413895 458 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 IFNA11P-201ENST00000446352 526 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 AC012308.1-201ENST00000451232 178 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-625P-201ENST00000459412 107 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 snoU13.26-201ENST00000459452 105 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RN7SKP43-201ENST00000516173 320 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-789P-201ENST00000517105 102 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 AC022559.1-201ENST00000520905 205 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 AL034555.1-201ENST00000604816 211 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC44A3Q8N4M1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 RNU1-62P-201ENST00000362599 164 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-1020P-201ENST00000363684 107 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-514P-201ENST00000384208 107 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-19P-201ENST00000384718 107 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 MIR504-201ENST00000385065 83 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 CBX3P9-201ENST00000402326 552 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AL133475.1-201ENST00000404414 305 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC004866.1-201ENST00000411748 78 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC107626.1-201ENST00000471084 183 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 RPL23AP70-201ENST00000483361 460 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC087441.2-201ENST00000529141 262 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC072026.1-201ENST00000605023 201 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC006001.4-201ENST00000622243 395 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 AC092593.1-201ENST00000515413 1815 ntBASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SLC44A3Q8N4M1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 AC010889.1-201ENST00000566193 2666 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 RNU1-35P-201ENST00000362782 153 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 U8.2-201ENST00000363156 134 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-1027P-201ENST00000383998 107 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 MIR208B-201ENST00000401172 77 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-191P-201ENST00000516295 94 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.703-201ENST00000516846 111 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 DEFB131C-201ENST00000528817 165 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 AC027176.1-201ENST00000560204 514 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 MIR3910-1-201ENST00000580936 111 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 MIR3133-201ENST00000583157 78 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 AL391813.1-201ENST00000603098 260 ntBASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 AC091932.3-201ENST00000624223 323 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms