Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC116Q8IYX3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CCDC116Q8IYX3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCDC116Q8IYX3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 RPS3AP1-201ENST00000413190 320 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 DBIP2-201ENST00000419076 262 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 RPL18P10-201ENST00000425606 538 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 SNORA71B-202ENST00000439232 272 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 AC021205.2-201ENST00000480069 347 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 AC006445.1-201ENST00000491925 405 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 AC099522.1-202ENST00000514718 367 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 MIR2114-201ENST00000516645 80 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 RNU6-1270P-201ENST00000517128 108 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 RN7SL703P-201ENST00000578485 302 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 MIR5047-201ENST00000579212 100 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 MIR4438-201ENST00000585271 93 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 AL442128.1-201ENST00000615151 90 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CCDC116Q8IYX3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 ZNF962P-201ENST00000443465 3140 ntBASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 MIR383-201ENST00000362257 73 ntBASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 RNU6-944P-201ENST00000364023 107 ntBASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 MIR591-201ENST00000385290 95 ntBASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 RN7SL330P-201ENST00000469709 307 ntBASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 AC011406.1-201ENST00000512440 370 ntBASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC116Q8IYX3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 Y_RNA.220-201ENST00000364244 109 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 SNORD61-201ENST00000384252 73 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 RNY1P7-201ENST00000384743 110 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 AC006011.1-201ENST00000442758 349 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 NDUFA4P2-201ENST00000489989 244 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 RPS29P21-201ENST00000496272 170 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 AC025554.1-201ENST00000505641 188 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 MRPS17P9-201ENST00000511924 393 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 RNU6-109P-201ENST00000516364 107 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 RNU6-184P-201ENST00000516514 107 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 VN1R85P-201ENST00000601587 426 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 MIR6758-201ENST00000620653 63 ntBASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCDC116Q8IYX3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 MIR590-201ENST00000385008 97 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 MIR181B1-201ENST00000385240 110 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 AL031121.1-201ENST00000406553 254 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 AL513477.1-202ENST00000417061 214 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 RNA5SP246-201ENST00000458909 119 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 RPL21P129-201ENST00000491732 478 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 AC103810.1-201ENST00000579873 453 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC116Q8IYX3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 RNU6-888P-201ENST00000363010 101 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 AL117342.1-201ENST00000404861 406 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 RNA5SP38-201ENST00000410750 119 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 RN7SKP12-201ENST00000516275 143 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 RNU7-143P-201ENST00000516781 65 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 SCARNA15-202ENST00000516881 127 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 CYCSP29-201ENST00000533731 318 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 AC069240.1-201ENST00000548774 375 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 AC020914.4-201ENST00000597690 277 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 MIR8059-201ENST00000620427 81 ntBASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC116Q8IYX3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 Y_RNA.198-201ENST00000364013 98 ntBASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 RNU6-573P-201ENST00000383938 106 ntBASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 RPL29P14-201ENST00000495837 428 ntBASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 SNORA31.9-201ENST00000516429 84 ntBASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 RNU6-1096P-201ENST00000517089 102 ntBASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 AP003730.1-201ENST00000524605 285 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms