Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR218-1-201ENST00000384999 110 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 SNORA48.2-201ENST00000390926 124 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 SNORA26.5-201ENST00000391215 123 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 AL353705.1-201ENST00000433468 480 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RNU7-14P-201ENST00000459331 62 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 AC091021.1-201ENST00000468051 388 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RPS29P2-201ENST00000479278 136 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-789P-201ENST00000517105 102 ntBASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM48Q8IWZ4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 SNORA19-201ENST00000384737 128 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 MIR29B2-201ENST00000385055 81 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 AC022018.1-201ENST00000430685 241 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 AL392103.1-201ENST00000447000 198 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-346P-201ENST00000516288 111 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 Y_RNA.703-201ENST00000516846 111 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 MTND5P41-201ENST00000517498 206 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 MIR5692C2-201ENST00000577959 77 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 UBL5P2-201ENST00000583788 219 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 MIR7515-201ENST00000637837 67 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 AC068700.1-201ENST00000565862 3754 ntBASIC3.06□□□□□ -1.92
TRIM48Q8IWZ4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 RNU1-72P-201ENST00000362976 153 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-486P-201ENST00000363116 107 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 SNORA7.4-201ENST00000384249 137 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 MIR591-201ENST00000385290 95 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 RNU2-2P-201ENST00000410396 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 AC136628.3-201ENST00000521868 290 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 RNU2-4P-201ENST00000606190 192 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 AC099778.2-201ENST00000610904 211 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.15-201ENST00000611544 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.16-201ENST00000613119 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.12-201ENST00000613778 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.9-201ENST00000615427 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.11-201ENST00000616345 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.2-201ENST00000616535 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.3-201ENST00000617785 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.19-201ENST00000618602 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 RNU2-1-201ENST00000618664 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.6-201ENST00000619225 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.5-201ENST00000619465 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 U2.10-201ENST00000620268 191 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 AC008873.1-201ENST00000625051 138 ntBASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM48Q8IWZ4 RNU4-10P-201ENST00000364383 140 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 SNORD14D-201ENST00000384390 87 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 MTCO2P33-201ENST00000402100 465 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 AL139095.1-201ENST00000404326 391 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 MIR1294-201ENST00000408503 142 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-855P-201ENST00000410395 104 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 RPL32P35-201ENST00000415214 394 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 AL451074.5-201ENST00000415894 435 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 RPL30P4-201ENST00000429309 333 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 AC090515.1-201ENST00000465295 476 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 HMGN2P9-201ENST00000476875 229 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 SRIP1-201ENST00000489235 288 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 MIR3144-201ENST00000579460 79 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 MIR622-201ENST00000638396 96 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM48Q8IWZ4 SNORA71.1-201ENST00000364523 117 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 Y_RNA.435-201ENST00000384095 112 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 Y_RNA.571-201ENST00000384753 98 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 MIR586-201ENST00000385035 97 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 MIR1185-2-201ENST00000408687 86 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 RNU6-1135P-201ENST00000411083 103 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 ATP5EP1-201ENST00000510257 156 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 SUMO2P18-201ENST00000518873 252 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 MIR3910-1-201ENST00000580936 111 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 AL713866.2-201ENST00000603579 219 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 RPL17P51-201ENST00000605218 238 ntBASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM48Q8IWZ4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms