Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 IFNA11P-201ENST00000446352 526 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 MTND4LP30-201ENST00000454092 297 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC080013.2-201ENST00000460866 323 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 RPL39P38-201ENST00000467018 153 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC107222.1-201ENST00000510899 637 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AK6P2-201ENST00000549020 471 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC018448.1-201ENST00000552843 316 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC233702.2-202ENST00000562547 291 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC005357.1-201ENST00000588399 301 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC010900.2-201ENST00000604508 210 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC005562.2-201ENST00000618264 111 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 AC078938.1-201ENST00000620993 318 ntBASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
C9orf139Q6ZV77 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.15□□□□□ -2.06
C9orf139Q6ZV77 MIR335-201ENST00000362173 94 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RNU1-62P-201ENST00000362599 164 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 SNORD81.1-201ENST00000363064 77 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RNU6-486P-201ENST00000363116 107 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RNU5F-3P-201ENST00000363767 117 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 SNORA18.2-201ENST00000383865 132 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 MIR181A2-201ENST00000384863 110 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RN7SKP284-201ENST00000411002 343 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RPL30P4-201ENST00000429309 333 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RPL39P40-201ENST00000445481 146 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 UQCRBP2-201ENST00000447827 297 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 AC140059.1-201ENST00000489238 361 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 RNU6-1023P-201ENST00000516137 106 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.673-201ENST00000516306 88 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 SCARNA3-201ENST00000517097 143 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 HSPE1P18-201ENST00000517602 280 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 TCL6_2.1-201ENST00000615162 119 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.15□□□□□ -2.07
C9orf139Q6ZV77 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AL391987.6-201ENST00000305671 199 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 SNORD32B-201ENST00000364460 84 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.415-201ENST00000384012 112 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AL033519.2-201ENST00000403958 392 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 MIR320B2-201ENST00000408479 138 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 U6atac.2-201ENST00000408644 118 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 RNA5SP504-201ENST00000410676 117 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 RNU5A-5P-201ENST00000411054 116 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 RPS23P5-201ENST00000495419 428 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AC074133.1-201ENST00000515696 183 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 RNU6-966P-201ENST00000516479 104 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 RNU2-44P-201ENST00000516795 194 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 RNU7-110P-201ENST00000516891 62 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 CYCSP23-201ENST00000519781 313 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AP002001.1-203ENST00000534002 267 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AC026470.2-201ENST00000561492 181 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 MIR3668-201ENST00000582138 75 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 MIR5006-201ENST00000583027 110 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 AC090517.3-201ENST00000625170 141 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 CTSLP2-204ENST00000629029 392 ntBASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
C9orf139Q6ZV77 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RNU4-90P-201ENST00000362773 141 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.230-201ENST00000364348 109 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RNU6-1175P-201ENST00000365200 107 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RNU6-290P-201ENST00000365212 101 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RNU6-1026P-201ENST00000384465 108 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 MIR218-1-201ENST00000384999 110 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AL590004.2-201ENST00000404787 371 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.597-201ENST00000410463 100 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RPS29P6-201ENST00000438196 145 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RPL23AP3-201ENST00000453844 468 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RNU6-625P-201ENST00000459412 107 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RPS27AP9-201ENST00000477681 438 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 SEPT14P8-201ENST00000508026 178 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RNA5SP148-201ENST00000516527 94 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 RNU6-344P-201ENST00000516635 111 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AC027176.1-201ENST00000560204 514 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AC023043.3-201ENST00000593113 385 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AC005176.2-201ENST00000596933 147 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AL713866.2-201ENST00000603579 219 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AL670379.2-201ENST00000604983 252 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms