Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL050343.2-201ENST00000607338 280 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 AL353149.1-201ENST00000610667 244 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 SCARNA4-201ENST00000629045 128 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 MIR338-201ENST00000636369 67 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 AC010615.1-201ENST00000594254 1764 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 Y_RNA.212-201ENST00000364177 102 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 RNU6-1019P-201ENST00000364424 107 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 SNORD116-11-201ENST00000383882 92 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 Y_RNA.414-201ENST00000384011 101 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 RNU6-933P-201ENST00000384424 107 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 SNORD116-4-201ENST00000384733 96 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AL591704.2-201ENST00000421658 181 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AL353572.1-201ENST00000442490 417 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AC016717.1-201ENST00000448918 286 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AC005908.1-201ENST00000468701 347 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.37□□□□□ -2.19
ATL3Q6DD88 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 RNA5SP437-201ENST00000517249 129 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AC008269.2-201ENST00000561915 1105 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.37□□□□□ -2.19
ATL3Q6DD88 MIR4498-201ENST00000577599 66 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AC146944.4-201ENST00000602697 718 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 SNRPGP20-201ENST00000604477 205 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.37□□□□□ -2.19
ATL3Q6DD88 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AC126177.8-201ENST00000618339 1015 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 AC137590.2-201ENST00000619709 240 ntBASIC1.37□□□□□ -2.19
ATL3Q6DD88 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ATL3Q6DD88 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ATL3Q6DD88 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ATL3Q6DD88 MTND4P5-201ENST00000435821 1374 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 Y_RNA.3-201ENST00000362331 103 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 Y_RNA.100-201ENST00000363141 102 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 RNU6-457P-201ENST00000363999 107 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 RNU6-1235P-201ENST00000384559 107 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 MIR586-201ENST00000385035 97 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 RNU6-1148P-201ENST00000410992 104 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.36□□□□□ -2.19
ATL3Q6DD88 RNU6-498P-201ENST00000459468 107 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.36□□□□□ -2.19
ATL3Q6DD88 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.36□□□□□ -2.19
ATL3Q6DD88 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.36□□□□□ -2.19
ATL3Q6DD88 MIR5696-201ENST00000578474 85 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 MIR4753-201ENST00000585119 83 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 AC245060.5-201ENST00000610778 3293 ntBASIC1.36□□□□□ -2.19
ATL3Q6DD88 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ATL3Q6DD88 Y_RNA.9-201ENST00000362354 101 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 RNU1-96P-201ENST00000364163 162 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 Y_RNA.450-201ENST00000384198 113 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
ATL3Q6DD88 RNA5SP504-201ENST00000410676 117 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 RNU6-373P-201ENST00000411247 98 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 HSPE1P9-201ENST00000440046 311 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 RPS29P28-201ENST00000446439 141 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 snoU13.30-201ENST00000458951 104 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 RNU6-344P-201ENST00000516635 111 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 MTND1P5-201ENST00000517906 940 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.35□□□□□ -2.19
ATL3Q6DD88 MIR3942-201ENST00000585264 109 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 snoU13.31-201ENST00000607291 104 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 AC090617.10-201ENST00000624308 134 ntBASIC1.35□□□□□ -2.19
ATL3Q6DD88 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.35□□□□□ -2.19
ATL3Q6DD88 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
ATL3Q6DD88 ZNF204P-201ENST00000416749 2397 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 MIR302D-201ENST00000362275 68 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 Y_RNA.89-201ENST00000363031 102 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 SNORD115-32-201ENST00000364079 82 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 Y_RNA.226-201ENST00000364337 114 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 MIR517A-201ENST00000385001 87 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 AL161935.2-201ENST00000414627 60 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 CST2P1-201ENST00000425770 87 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 DAP3P1-201ENST00000441522 278 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 RNA5SP54-201ENST00000516951 92 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 RNU6-58P-201ENST00000517143 103 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.34□□□□□ -2.19
ATL3Q6DD88 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.34□□□□□ -2.19
ATL3Q6DD88 AC095038.3-201ENST00000634439 195 ntBASIC1.34□□□□□ -2.19
ATL3Q6DD88 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.34□□□□□ -2.19
ATL3Q6DD88 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU6-271P-201ENST00000363858 105 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU6-534P-201ENST00000364877 106 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU4-9P-201ENST00000364951 139 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 SNORA25.9-201ENST00000365087 128 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU6-790P-201ENST00000384479 105 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 Y_RNA.516-201ENST00000384541 124 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU6-831P-201ENST00000384548 107 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 MIR548B-201ENST00000385247 97 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RNU2-7P-201ENST00000410794 178 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 AC108667.1-201ENST00000428618 249 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 MTCO3P29-201ENST00000432119 779 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 RPS26P55-201ENST00000471178 356 ntBASIC1.33□□□□□ -2.2
ATL3Q6DD88 AC099513.1-201ENST00000490423 301 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 1163.5 ms