Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 MTATP6P24-201ENST00000576835 677 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 MIR4452-201ENST00000583004 71 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.74□□□□□ -2.29
ZNF404Q494X3 AL390123.1-201ENST00000603216 237 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 MIR8054-201ENST00000620877 86 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 MIR373-201ENST00000362273 69 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 Y_RNA.381-201ENST00000365666 102 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 RNU6-1103P-201ENST00000384150 107 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 MIR521-1-201ENST00000384902 87 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 MIR450B-201ENST00000401182 78 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AL049545.1-201ENST00000401856 572 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 MIR1287-201ENST00000408492 90 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 RNU6-325P-201ENST00000411132 105 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.73□□□□□ -2.29
ZNF404Q494X3 MTCO2P19-201ENST00000427513 598 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AC245047.3-201ENST00000429428 127 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AC005002.2-201ENST00000438228 269 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
ZNF404Q494X3 AL359672.1-201ENST00000442302 409 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.73□□□□□ -2.29
ZNF404Q494X3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.73□□□□□ -2.29
ZNF404Q494X3 SNORA19.2-201ENST00000516013 114 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 SNORA31.2-201ENST00000516019 134 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.73□□□□□ -2.29
ZNF404Q494X3 CBX3P8-201ENST00000532412 525 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AL157687.1-201ENST00000554853 619 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AC136932.1-201ENST00000574771 208 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 MIR4528-201ENST00000577763 90 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 MIR5695-201ENST00000579717 85 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 MIR5692C1-201ENST00000585309 91 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 AL121757.2-201ENST00000611223 313 ntBASIC0.73□□□□□ -2.29
ZNF404Q494X3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.73□□□□□ -2.29
ZNF404Q494X3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
ZNF404Q494X3 RNU6-505P-201ENST00000384427 107 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 RNY3P9-201ENST00000384727 106 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 MIR487A-201ENST00000385009 80 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 RNU11-5P-201ENST00000391216 129 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ZNF404Q494X3 AL663109.1-201ENST00000411498 844 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 AL353193.1-201ENST00000421444 268 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 MRPS10P2-201ENST00000431226 381 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.72□□□□□ -2.29
ZNF404Q494X3 AL606489.2-201ENST00000433886 234 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 RNA5SP401-201ENST00000515920 127 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 RNU6-922P-201ENST00000516753 99 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.72□□□□□ -2.29
ZNF404Q494X3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.72□□□□□ -2.29
ZNF404Q494X3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.72□□□□□ -2.29
ZNF404Q494X3 AL118558.2-201ENST00000556294 238 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 FAM106DP-201ENST00000586416 501 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 SNORD11B-201ENST00000607707 90 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 MIR8076-201ENST00000611401 83 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 AL021879.1-201ENST00000611756 288 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.72□□□□□ -2.29
ZNF404Q494X3 AL513423.1-201ENST00000621695 132 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 SNORD3E-202ENST00000627253 216 ntBASIC0.72□□□□□ -2.29
ZNF404Q494X3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNU4-79P-201ENST00000362764 141 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNU4-66P-201ENST00000365199 138 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 Y_RNA.378-201ENST00000365652 113 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNU6-784P-201ENST00000384330 106 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNU6-933P-201ENST00000384424 107 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 MIR19B1-201ENST00000384829 87 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 MIR520E-201ENST00000384867 87 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNU6-910P-201ENST00000390844 107 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNU6-440P-201ENST00000390882 105 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 MRPL42P3-201ENST00000401492 326 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 AL034345.1-201ENST00000407768 123 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.71□□□□□ -2.3
ZNF404Q494X3 USP9YP29-201ENST00000445112 563 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 MTCO1P29-201ENST00000496868 288 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 SNORA40.12-201ENST00000516329 111 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 RNA5SP454-201ENST00000517231 127 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 MIR4698-201ENST00000577795 80 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.71□□□□□ -2.3
ZNF404Q494X3 AC008088.1-201ENST00000580993 280 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 AC073648.5-201ENST00000603502 305 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 AL513534.2-201ENST00000603836 250 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 AC007684.1-201ENST00000609671 477 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 AC106754.2-201ENST00000623006 233 ntBASIC0.71□□□□□ -2.3
ZNF404Q494X3 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
ZNF404Q494X3 RNU6-214P-201ENST00000384130 107 ntBASIC0.7□□□□□ -2.3
ZNF404Q494X3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.7□□□□□ -2.3
ZNF404Q494X3 RNA5SP504-201ENST00000410676 117 ntBASIC0.7□□□□□ -2.3
ZNF404Q494X3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.7□□□□□ -2.3
ZNF404Q494X3 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
ZNF404Q494X3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.7□□□□□ -2.3
ZNF404Q494X3 RPS4XP11-201ENST00000446897 772 ntBASIC0.7□□□□□ -2.3
ZNF404Q494X3 RPL23AP75-201ENST00000491601 451 ntBASIC0.7□□□□□ -2.3
ZNF404Q494X3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.7□□□□□ -2.3
ZNF404Q494X3 Y_RNA.654-201ENST00000497848 106 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms